[HTML][HTML] Unbox the black-box for the medical explainable AI via multi-modal and multi-centre data fusion: A mini-review, two showcases and beyond

G Yang, Q Ye, J **a - Information Fusion, 2022 - Elsevier
Abstract Explainable Artificial Intelligence (XAI) is an emerging research topic of machine
learning aimed at unboxing how AI systems' black-box choices are made. This research field …

Machine learning for the diagnosis of Parkinson's disease: a review of literature

J Mei, C Desrosiers, J Frasnelli - Frontiers in aging neuroscience, 2021 - frontiersin.org
Diagnosis of Parkinson's disease (PD) is commonly based on medical observations and
assessment of clinical signs, including the characterization of a variety of motor symptoms …

Mash: fast genome and metagenome distance estimation using MinHash

BD Ondov, TJ Treangen, P Melsted, AB Mallonee… - Genome biology, 2016 - Springer
Mash extends the MinHash dimensionality-reduction technique to include a pairwise
mutation distance and P value significance test, enabling the efficient clustering and search …

Graph neural networks and their current applications in bioinformatics

XM Zhang, L Liang, L Liu, MJ Tang - Frontiers in genetics, 2021 - frontiersin.org
Graph neural networks (GNNs), as a branch of deep learning in non-Euclidean space,
perform particularly well in various tasks that process graph structure data. With the rapid …

Machine learning approaches and databases for prediction of drug–target interaction: a survey paper

M Bagherian, E Sabeti, K Wang… - Briefings in …, 2021 - academic.oup.com
The task of predicting the interactions between drugs and targets plays a key role in the
process of drug discovery. There is a need to develop novel and efficient prediction …

COVID-19 cough classification using machine learning and global smartphone recordings

M Pahar, M Klopper, R Warren, T Niesler - Computers in Biology and …, 2021 - Elsevier
We present a machine learning based COVID-19 cough classifier which can discriminate
COVID-19 positive coughs from both COVID-19 negative and healthy coughs recorded on a …

Deep learning with multimodal representation for pancancer prognosis prediction

A Cheerla, O Gevaert - Bioinformatics, 2019 - academic.oup.com
Motivation Estimating the future course of patients with cancer lesions is invaluable to
physicians; however, current clinical methods fail to effectively use the vast amount of …

Emotion recognition for human-robot interaction: Recent advances and future perspectives

M Spezialetti, G Placidi, S Rossi - Frontiers in Robotics and AI, 2020 - frontiersin.org
A fascinating challenge in the field of human–robot interaction is the possibility to endow
robots with emotional intelligence in order to make the interaction more intuitive, genuine …

[HTML][HTML] PhyloSift: phylogenetic analysis of genomes and metagenomes

AE Darling, G Jospin, E Lowe, FA Matsen IV, HM Bik… - PeerJ, 2014 - peerj.com
Like all organisms on the planet, environmental microbes are subject to the forces of
molecular evolution. Metagenomic sequencing provides a means to access the DNA …

Ray Meta: scalable de novo metagenome assembly and profiling

S Boisvert, F Raymond, É Godzaridis, F Laviolette… - Genome biology, 2012 - Springer
Abstracta Voluminous parallel sequencing datasets, especially metagenomic experiments,
require distributed computing for de novo assembly and taxonomic profiling. Ray Meta is a …