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Packaging and containerization of computational methods
Methods for analyzing the full complement of a biomolecule type, eg, proteomics or
metabolomics, generate large amounts of complex data. The software tools used to analyze …
metabolomics, generate large amounts of complex data. The software tools used to analyze …
Reproducibility, Replicability and Repeatability: A survey of reproducible research with a focus on high performance computing
Reproducibility is widely acknowledged as a fundamental principle in scientific research.
Currently, the scientific community grapples with numerous challenges associated with …
Currently, the scientific community grapples with numerous challenges associated with …
The Spack package manager: bringing order to HPC software chaos
Large HPC centers spend considerable time supporting software for thousands of users, but
the complexity of HPC software is quickly outpacing the capabilities of existing software …
the complexity of HPC software is quickly outpacing the capabilities of existing software …
Fresh apps: an empirical study of frequently-updated mobile apps in the Google play store
Mobile app stores provide a unique platform for developers to rapidly deploy new updates of
their apps. We studied the frequency of updates of 10,713 mobile apps (the top free 400 …
their apps. We studied the frequency of updates of 10,713 mobile apps (the top free 400 …
Stratego/XT 0.17. A language and toolset for program transformation
Stratego/XT is a language and toolset for program transformation. The Stratego language
provides rewrite rules for expressing basic transformations, programmable rewriting …
provides rewrite rules for expressing basic transformations, programmable rewriting …
Do faster releases improve software quality? an empirical case study of mozilla firefox
Nowadays, many software companies are shifting from the traditional 18-month release
cycle to shorter release cycles. For example, Google Chrome and Mozilla Firefox release …
cycle to shorter release cycles. For example, Google Chrome and Mozilla Firefox release …
Modern release engineering in a nutshell--why researchers should care
The release engineering process is the process that brings high quality code changes from
a developer's workspace to the end user, encompassing code change integration …
a developer's workspace to the end user, encompassing code change integration …
PiGx: reproducible genomics analysis pipelines with GNU Guix
In bioinformatics, as well as other computationally intensive research fields, there is a need
for workflows that can reliably produce consistent output, from known sources, independent …
for workflows that can reliably produce consistent output, from known sources, independent …
Reproducible and user-controlled software environments in HPC with Guix
L Courtès, R Wurmus - Euro-Par 2015: Parallel Processing Workshops …, 2015 - Springer
Support teams of high-performance computing (HPC) systems often find themselves
between a rock and a hard place: on one hand, they understandably administrate these …
between a rock and a hard place: on one hand, they understandably administrate these …
[ספר][B] The purely functional software deployment model
E Dolstra - 2006 - edolstra.github.io
Proefschrift ter verkrijging van de graad van doctor aan de Universiteit Utrecht op gezag van
de Rector Magnificus, Prof. dr. WH Gispen, ingevolge het besluit van het College voor …
de Rector Magnificus, Prof. dr. WH Gispen, ingevolge het besluit van het College voor …