Experiences from the anatomy track in the ontology alignment evaluation initiative

Z Dragisic, V Ivanova, H Li, P Lambrix - Journal of biomedical semantics, 2017‏ - Springer
Background One of the longest running tracks in the Ontology Alignment Evaluation Initiative
is the Anatomy track which focuses on aligning two anatomy ontologies. The Anatomy track …

Multi-domain knowledge graph embeddings for gene-disease association prediction

S Nunes, RT Sousa, C Pesquita - Journal of Biomedical Semantics, 2023‏ - Springer
Background Predicting gene-disease associations typically requires exploring diverse
sources of information as well as sophisticated computational approaches. Knowledge …

Background knowledge in ontology matching: A survey

J Portisch, M Hladik, H Paulheim - Semantic Web, 2024‏ - journals.sagepub.com
Ontology matching is an integral part for establishing semantic interoperability. One of the
main challenges within the ontology matching operation is semantic heterogeneity, ie …

Ontology alignment repair through modularization and confidence-based heuristics

E Santos, D Faria, C Pesquita, FM Couto - PloS one, 2015‏ - journals.plos.org
Ontology Matching aims at identifying a set of semantic correspondences, called an
alignment, between related ontologies. In recent years, there has been a growing interest in …

Tackling the challenges of matching biomedical ontologies

D Faria, C Pesquita, I Mott, C Martins, FM Couto… - Journal of biomedical …, 2018‏ - Springer
Background Biomedical ontologies pose several challenges to ontology matching due both
to the complexity of the biomedical domain and to the characteristics of the ontologies …

Overview of YAM++—(not) Yet Another Matcher for ontology alignment task

DH Ngo, Z Bellahsene - Journal of Web Semantics, 2016‏ - Elsevier
Several challenges to the field of ontology matching have been outlined in recent research.
The selection of the appropriate similarity measures as well as the configuration tuning of …

Automatic background knowledge selection for matching biomedical ontologies

D Faria, C Pesquita, E Santos, IF Cruz, FM Couto - PloS one, 2014‏ - journals.plos.org
Ontology matching is a growing field of research that is of critical importance for the semantic
web initiative. The use of background knowledge for ontology matching is often a key factor …

Review of ontology matching with background knowledge

IG Husein, S Akbar, B Sitohang… - … Conference on Data …, 2016‏ - ieeexplore.ieee.org
The ontology matching process with background knowledge is more suitable to match
heterogeneous ontologies, since background knowledge is used as a mediator or a …

Effectiveness of automatic translations for cross-lingual ontology map**

MA Helou, M Palmonari, M Jarrar - Journal of Artificial Intelligence Research, 2016‏ - jair.org
Accessing or integrating data lexicalized in different languages is a challenge. Multilingual
lexical resources play a fundamental role in reducing the language barriers to map concepts …

Tools for ontology matching—practical considerations from INTER-IoT perspective

M Ganzha, M Paprzycki, W Pawłowski… - Internet and Distributed …, 2016‏ - Springer
There exists a large body of scientific literature devoted to ontology matching, aligning,
map** translating and merging. With it, comes a long list (90+) of tools that support various …