Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

M Ravinet, R Faria, RK Butlin, J Galindo… - Journal of …, 2017 - academic.oup.com
Speciation, the evolution of reproductive isolation among populations, is continuous,
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …

Coevolution between transposable elements and recombination

TV Kent, J Uzunović, SI Wright - … Transactions of the …, 2017 - royalsocietypublishing.org
One of the most striking patterns of genome structure is the tight, typically negative,
association between transposable elements (TEs) and meiotic recombination rates. While …

Adaptive sequence divergence forged new neurodevelopmental enhancers in humans

RJ Mangan, FC Alsina, F Mosti, JE Sotelo-Fonseca… - Cell, 2022 - cell.com
Searches for the genetic underpinnings of uniquely human traits have focused on human-
specific divergence in conserved genomic regions, which reflects adaptive modifications of …

Super-Mendelian inheritance mediated by CRISPR–Cas9 in the female mouse germline

HA Grunwald, VM Gantz, G Poplawski, XRS Xu, E Bier… - Nature, 2019 - nature.com
A gene drive biases the transmission of one of the two copies of a gene such that it is
inherited more frequently than by random segregation. Highly efficient gene drive systems …

Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares

MR Jones, LS Mills, PC Alves, CM Callahan, JM Alves… - Science, 2018 - science.org
Snowshoe hares (Lepus americanus) maintain seasonal camouflage by molting to a white
winter coat, but some hares remain brown during the winter in regions with low snow cover …

Stable recombination hotspots in birds

S Singhal, EM Leffler, K Sannareddy, I Turner, O Venn… - Science, 2015 - science.org
The DNA-binding protein PRDM9 has a critical role in specifying meiotic recombination
hotspots in mice and apes, but it appears to be absent from other vertebrate species …

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

Project management: Fulton Lucinda A. 1 Mardis … - Nature, 2004 - nature.com
We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the
chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to …

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

University of Utah Weiss Robert B. 14 Dunn Diane M … - Nature, 2004 - nature.com
The laboratory rat (Rattus norvegicus) is an indispensable tool in experimental medicine
and drug development, having made inestimable contributions to human health. We report …

Initial sequence of the chimpanzee genome and comparison with the human genome

… Sequencing and Analysis Consortium Waterson Robert … - Nature, 2005 - nature.com
Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes).
Through comparison with the human genome, we have generated a largely complete …

Quantification of inbreeding due to distant ancestors and its detection using dense single nucleotide polymorphism data

MC Keller, PM Visscher, ME Goddard - Genetics, 2011 - academic.oup.com
Inbreeding depression, which refers to reduced fitness among offspring of related parents,
has traditionally been studied using pedigrees. In practice, pedigree information is difficult to …