Three-dimensional nanoscale reduced-angle ptycho-tomographic imaging with deep learning (RAPID)

Z Wu, I Kang, Y Yao, Y Jiang, J Deng, J Klug, S Vogt… - eLight, 2023 - Springer
X-ray ptychographic tomography is a nondestructive method for three dimensional (3D)
imaging with nanometer-sized resolvable features. The size of the volume that can be …

[PDF][PDF] Small-angle scattering tensor tomography algorithm for robust reconstruction of complex textures

LC Nielsen, P Erhart, M Guizar-Sicairos… - … Section A: Foundations …, 2023 - journals.iucr.org
The development of small-angle scattering tensor tomography has enabled the study of
anisotropic nanostructures in a volume-resolved manner. It is of great value to have …

Petascale XCT: 3D image reconstruction with hierarchical communications on multi-GPU nodes

M Hidayetoğlu, T Bicer, SG De Gonzalo… - … Conference for High …, 2020 - ieeexplore.ieee.org
X-ray computed tomography is a commonly used technique for noninvasive imaging at
synchrotron facilities. Iterative tomographic reconstruction algorithms are often preferred for …

Three dimensions, two microscopes, one code: Automatic differentiation for x-ray nanotomography beyond the depth of focus limit

M Du, YSG Nashed, S Kandel, D Gürsoy… - Science advances, 2020 - science.org
Conventional tomographic reconstruction algorithms assume that one has obtained pure
projection images, involving no within-specimen diffraction effects nor multiple scattering …

Scalable and accurate multi-GPU-based image reconstruction of large-scale ptychography data

X Yu, V Nikitin, DJ Ching, S Aslan, D Gürsoy, T Biçer - Scientific reports, 2022 - nature.com
While the advances in synchrotron light sources, together with the development of focusing
optics and detectors, allow nanoscale ptychographic imaging of materials and biological …

X-ray nano-holotomography reconstruction with simultaneous probe retrieval

V Nikitin, M Carlsson, D Gürsoy, R Mokso… - Optics …, 2024 - opg.optica.org
In conventional tomographic reconstruction, the pre-processing step includes flat-field
correction, where each sample projection on the detector is divided by a reference image …

Multi-slice electron ptychographic tomography for three-dimensional phase-contrast microscopy beyond the depth of focus limits

A Romanov, MG Cho, MC Scott… - Journal of Physics …, 2024 - iopscience.iop.org
Electron ptychography is a powerful computational method for atomic-resolution imaging
with high contrast for weakly and strongly scattering elements. Modern algorithms coupled …

Coupled ptychography and tomography algorithm improves reconstruction of experimental data

M Kahnt, J Becher, D Brückner, Y Fam, T Sheppard… - Optica, 2019 - opg.optica.org
Three-dimensional (3D) x-ray microscopy by ptychographic tomography requires elaborate
numerical reconstructions. We describe a coupled ptychography-tomography reconstruction …

Ptychographic phase retrieval by proximal algorithms

H Yan - New Journal of Physics, 2020 - iopscience.iop.org
We derive a set of ptychography phase-retrieval iterative engines based on proximal
algorithms originally developed in convex optimization theory, and discuss their connections …

Distributed optimization for nonrigid nano-tomography

V Nikitin, V De Andrade, A Slyamov… - IEEE Transactions …, 2021 - ieeexplore.ieee.org
Resolution level and reconstruction quality in nano-computed tomography (nano-CT) are in
part limited by the stability of microscopes, because the magnitude of mechanical vibrations …