Knowledge-based biomedical data science

TJ Callahan, IJ Tripodi… - Annual review of …, 2020 - annualreviews.org
Knowledge-based biomedical data science involves the design and implementation of
computer systems that act as if they knew about biomedicine. Such systems depend on …

The Incredible ELK: From Polynomial Procedures to Efficient Reasoning with ℰ ℒ Ontologies

Y Kazakov, M Krötzsch, F Simančík - Journal of automated reasoning, 2014 - Springer
Abstract ℰ ℒ EL is a simple tractable Description Logic that features conjunctions and
existential restrictions. Due to its favorable computational properties and relevance to …

The environment ontology: contextualising biological and biomedical entities

PL Buttigieg, N Morrison, B Smith, CJ Mungall… - Journal of biomedical …, 2013 - Springer
As biological and biomedical research increasingly reference the environmental context of
the biological entities under study, the need for formalisation and standardisation of …

Ontology integration: approaches and challenging issues

I Osman, SB Yahia, G Diallo - Information Fusion, 2021 - Elsevier
In recent years, the decentralized development of ontologies has led to the generation of
multiple ontologies of overlap** knowledge. This heterogeneity problem can be tackled by …

OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction

FZ Smaili, X Gao, R Hoehndorf - Bioinformatics, 2019 - academic.oup.com
Motivation Ontologies are widely used in biology for data annotation, integration and
analysis. In addition to formally structured axioms, ontologies contain meta-data in the form …

Verification of large synthesized designs

D Brand - Proceedings of 1993 International Conference on …, 1993 - ieeexplore.ieee.org
Verification of large synthesized designs Page 1 Verification of Large Synthesized Designs
Daniel Brand IBM Research Division Thomas J. Watson Research Center Yorktown Heights …

[PDF][PDF] A survey on ontology reasoners and comparison

S Abburu - International Journal of Computer Applications, 2012 - Citeseer
Reasoner is a software that is used to derive new facts from the existing ontologies. Some of
the popular reasoners developed in the last few years are: Pellet, RACER, FACT++ …

[HTML][HTML] Ontology for experimentation of human-building interactions using virtual reality

C Chokwitthaya, Y Zhu, W Lu - Advanced Engineering Informatics, 2023 - Elsevier
Scientific experiments significantly enhance the understanding of human-building
interactions in building and engineering research. Recently, conducting virtual reality (VR) …

An introduction to ontology engineering

CM Keet - 2018 - open.uct.ac.za
Abstract An Introduction to Ontology Engineering is a free online textbook that provides an
overview of ontology engineering, including logics and automated reasoning, methods and …

[HTML][HTML] A new semantics for overriding in description logics

PA Bonatti, M Faella, IM Petrova, L Sauro - Artificial Intelligence, 2015 - Elsevier
Many modern applications of description logics (DLs, for short), such as biomedical
ontologies and semantic web policies, provide fresh motivations for extending DLs with …