Electrostatic interactions in protein structure, folding, binding, and condensation
Charged and polar groups, through forming ion pairs, hydrogen bonds, and other less
specific electrostatic interactions, impart important properties to proteins. Modulation of the …
specific electrostatic interactions, impart important properties to proteins. Modulation of the …
Protein analysis by shotgun/bottom-up proteomics
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
[HTML][HTML] Macromolecular condensation buffers intracellular water potential
Optimum protein function and biochemical activity critically depends on water availability
because solvent thermodynamics drive protein folding and macromolecular interactions …
because solvent thermodynamics drive protein folding and macromolecular interactions …
Structure of activated transcription complex Pol II–DSIF–PAF–SPT6
Gene regulation involves activation of RNA polymerase II (Pol II) that is paused and bound
by the protein complexes DRB sensitivity-inducing factor (DSIF) and negative elongation …
by the protein complexes DRB sensitivity-inducing factor (DSIF) and negative elongation …
15 years of PhosphoSitePlus®: integrating post-translationally modified sites, disease variants and isoforms
PV Hornbeck, JM Kornhauser, V Latham… - Nucleic acids …, 2019 - academic.oup.com
For 15 years the mission of PhosphoSitePlus®(PSP, https://www. phosphosite. org) has
been to provide comprehensive information and tools for the study of mammalian post …
been to provide comprehensive information and tools for the study of mammalian post …
TFEB links autophagy to lysosomal biogenesis
Autophagy is a cellular catabolic process that relies on the cooperation of autophagosomes
and lysosomes. During starvation, the cell expands both compartments to enhance …
and lysosomes. During starvation, the cell expands both compartments to enhance …
Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database
Post-translational modifications (PTMs) broadly contribute to the recent explosion of
proteomic data and possess a complexity surpassing that of protein design. PTMs are the …
proteomic data and possess a complexity surpassing that of protein design. PTMs are the …
A mass spectrometric-derived cell surface protein atlas
Cell surface proteins are major targets of biomedical research due to their utility as cellular
markers and their extracellular accessibility for pharmacological intervention. However …
markers and their extracellular accessibility for pharmacological intervention. However …
Status of large-scale analysis of post-translational modifications by mass spectrometry
Cellular function can be controlled through the gene expression program, but often protein
post-translational modifications (PTMs) provide a more precise and elegant mechanism. Key …
post-translational modifications (PTMs) provide a more precise and elegant mechanism. Key …
Lysine acetylation targets protein complexes and co-regulates major cellular functions
Lysine acetylation is a reversible posttranslational modification of proteins and plays a key
role in regulating gene expression. Technological limitations have so far prevented a global …
role in regulating gene expression. Technological limitations have so far prevented a global …