Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants

KS Makarova, YI Wolf, J Iranzo, SA Shmakov… - Nature Reviews …, 2020 - nature.com
The number and diversity of known CRISPR–Cas systems have substantially increased in
recent years. Here, we provide an updated evolutionary classification of CRISPR–Cas …

Examining horizontal gene transfer in microbial communities

IL Brito - Nature Reviews Microbiology, 2021 - nature.com
Bacteria acquire novel DNA through horizontal gene transfer (HGT), a process that enables
an organism to rapidly adapt to changing environmental conditions, provides a competitive …

The pan-immune system of bacteria: antiviral defence as a community resource

A Bernheim, R Sorek - Nature reviews microbiology, 2020 - nature.com
Viruses and their hosts are engaged in a constant arms race leading to the evolution of
antiviral defence mechanisms. Recent studies have revealed that the immune arsenal of …

The biology of CRISPR-Cas: backward and forward

F Hille, H Richter, SP Wong, M Bratovič, S Ressel… - Cell, 2018 - cell.com
In bacteria and archaea, clustered regularly interspaced short palindromic repeats
(CRISPR) and CRISPR-associated (Cas) proteins constitute an adaptive immune system …

Diversity and evolution of class 2 CRISPR–Cas systems

S Shmakov, A Smargon, D Scott, D Cox… - Nature reviews …, 2017 - nature.com
Class 2 CRISPR–Cas systems are characterized by effector modules that consist of a single
multidomain protein, such as Cas9 or Cpf1. We designed a computational pipeline for the …

CRISPR-Cas: biology, mechanisms and relevance

F Hille, E Charpentier - … of the royal society B: biological …, 2016 - royalsocietypublishing.org
Prokaryotes have evolved several defence mechanisms to protect themselves from viral
predators. Clustered regularly interspaced short palindromic repeats (CRISPR) and their …

Anti-CRISPR: discovery, mechanism and function

A Pawluk, AR Davidson, KL Maxwell - Nature Reviews Microbiology, 2018 - nature.com
CRISPR–Cas adaptive immune systems are widespread among bacteria and archaea.
Recent studies have shown that these systems have minimal long-term evolutionary effects …

Molecular mechanisms of CRISPR-Cas immunity in bacteria

PM Nussenzweig, LA Marraffini - Annual review of genetics, 2020 - annualreviews.org
Prokaryotes have developed numerous defense strategies to combat the constant threat
posed by the diverse genetic parasites that endanger them. Clustered regularly interspaced …

Cas13-induced cellular dormancy prevents the rise of CRISPR-resistant bacteriophage

AJ Meeske, S Nakandakari-Higa, LA Marraffini - Nature, 2019 - nature.com
Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci in prokaryotes are
composed of 30–40-base-pair repeats separated by equally short sequences of plasmid …

CRISPR-Cas: adapting to change

SA Jackson, RE McKenzie, RD Fagerlund, SN Kieper… - Science, 2017 - science.org
BACKGROUND The arms race between prokaryotes and their perpetually evolving
predators has fueled the evolution of a defense arsenal. The so-called CRISPR-Cas …