Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation

ES Nakayasu, M Gritsenko, PD Piehowski, Y Gao… - Nature …, 2021 - nature.com
Mass-spectrometry-based proteomic analysis is a powerful approach for discovering new
disease biomarkers. However, certain critical steps of study design such as cohort selection …

The heterogeneous pathogenesis of type 1 diabetes mellitus

J Ilonen, J Lempainen, R Veijola - Nature Reviews Endocrinology, 2019 - nature.com
Type 1 diabetes mellitus (T1DM) results from the destruction of pancreatic β-cells that is
mediated by the immune system. Multiple genetic and environmental factors found in …

Early prediction of autoimmune (type 1) diabetes

SE Regnell, Å Lernmark - Diabetologia, 2017 - Springer
Underlying type 1 diabetes is a genetic aetiology dominated by the influence of specific HLA
haplotypes involving primarily the class II DR-DQ region. In genetically predisposed children …

Advances in targeted proteomics and applications to biomedical research

T Shi, E Song, S Nie, KD Rodland, T Liu, WJ Qian… - …, 2016 - Wiley Online Library
Targeted proteomics technique has emerged as a powerful protein quantification tool in
systems biology, biomedical research, and increasing for clinical applications. The most …

Extracellular vesicles in obesity and diabetes mellitus

F Pardo, R Villalobos-Labra, B Sobrevia… - Molecular aspects of …, 2018 - Elsevier
Cell-to-cell communication happens via diverse mechanisms including the synthesis,
release and transfer to target cells of extracellular vesicles (EVs). EVs include nanovesicles …

Relative and absolute quantitation in mass spectrometry–based proteomics

JA Ankney, A Muneer, X Chen - Annual review of analytical …, 2018 - annualreviews.org
Mass spectrometry–based quantitative proteomics is a powerful tool for gaining insights into
function and dynamics of biological systems. However, peptides with different sequences …

Predicting type 1 diabetes using biomarkers

E Bonifacio - Diabetes care, 2015 - diabetesjournals.org
Clinical type 1 diabetes is preceded by an asymptomatic phase that can be identified by
serum islet autoantibodies. This perspective proposes that there is now sufficient evidence …

Plasma gelsolin: indicator of inflammation and its potential as a diagnostic tool and therapeutic target

E Piktel, I Levental, B Durnaś, PA Janmey… - International journal of …, 2018 - mdpi.com
Gelsolin, an actin-depolymerizing protein expressed both in extracellular fluids and in the
cytoplasm of a majority of human cells, has been recently implicated in a variety of both …

A proteomic meta-analysis refinement of plasma extracellular vesicles

MC Vallejo, S Sarkar, EC Elliott, HR Henry, SM Powell… - Scientific Data, 2023 - nature.com
Extracellular vesicles play major roles in cell-to-cell communication and are excellent
biomarker candidates. However, studying plasma extracellular vesicles is challenging due …

[HTML][HTML] Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity

ES Nakayasu, LM Bramer, C Ansong… - Cell Reports …, 2023 - cell.com
Summary Type 1 diabetes (T1D) results from autoimmune destruction of β cells. Insufficient
availability of biomarkers represents a significant gap in understanding the disease cause …