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A survey on subgraph counting: concepts, algorithms, and applications to network motifs and graphlets
Computing subgraph frequencies is a fundamental task that lies at the core of several
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
Network analysis of particles and grains
The arrangements of particles and forces in granular materials have a complex organization
on multiple spatial scales that range from local structures to mesoscale and system-wide …
on multiple spatial scales that range from local structures to mesoscale and system-wide …
Tempme: Towards the explainability of temporal graph neural networks via motif discovery
Temporal graphs are widely used to model dynamic systems with time-varying interactions.
In real-world scenarios, the underlying mechanisms of generating future interactions in …
In real-world scenarios, the underlying mechanisms of generating future interactions in …
A subgraph isomorphism algorithm and its application to biochemical data
Background Graphs can represent biological networks at the molecular, protein, or species
level. An important query is to find all matches of a pattern graph to a target graph …
level. An important query is to find all matches of a pattern graph to a target graph …
Homomorphisms are a good basis for counting small subgraphs
We introduce graph motif parameters, a class of graph parameters that depend only on the
frequencies of constant-size induced subgraphs. Classical works by Lovász show that many …
frequencies of constant-size induced subgraphs. Classical works by Lovász show that many …
Higher-order networks representation and learning: A survey
Network data has become widespread, larger, and more complex over the years. Traditional
network data is dyadic, capturing the relations among pairs of entities. With the need to …
network data is dyadic, capturing the relations among pairs of entities. With the need to …
Biological network motif detection: principles and practice
Network motifs are statistically overrepresented sub-structures (sub-graphs) in a network,
and have been recognized as 'the simple building blocks of complex networks'. Study of …
and have been recognized as 'the simple building blocks of complex networks'. Study of …
A survey of current software for network analysis in molecular biology
Software for network motifs and modules is briefly reviewed, along with programs for
network comparison. The three major software packages for network analysis …
network comparison. The three major software packages for network analysis …
A survey of pattern mining in dynamic graphs
P Fournier‐Viger, G He, C Cheng, J Li… - … : Data Mining and …, 2020 - Wiley Online Library
Graph data is found in numerous domains such as for the analysis of social networks,
sensor networks, bioinformatics, industrial systems, and chemistry. Analyzing graphs to …
sensor networks, bioinformatics, industrial systems, and chemistry. Analyzing graphs to …
MODA: an efficient algorithm for network motif discovery in biological networks
In recent years, interest has been growing in the study of complex networks. Since Erdös
and Rényi (1960) proposed their random graph model about 50 years ago, many …
and Rényi (1960) proposed their random graph model about 50 years ago, many …