The role of 3D genome organization in development and cell differentiation

H Zheng, W **e - Nature reviews Molecular cell biology, 2019‏ - nature.com
In eukaryotes, the genome does not exist as a linear molecule but instead is hierarchically
packaged inside the nucleus. This complex genome organization includes multiscale …

The roles of histone deacetylases and their inhibitors in cancer therapy

G Li, Y Tian, WG Zhu - Frontiers in cell and developmental biology, 2020‏ - frontiersin.org
Genetic mutations and abnormal gene regulation are key mechanisms underlying
tumorigenesis. Nucleosomes, which consist of DNA wrapped around histone cores …

Condensed but liquid-like domain organization of active chromatin regions in living human cells

T Nozaki, S Shinkai, S Ide, K Higashi, S Tamura… - Science …, 2023‏ - science.org
In eukaryotes, higher-order chromatin organization is spatiotemporally regulated as
domains, for various cellular functions. However, their physical nature in living cells remains …

Dynamic organization of chromatin domains revealed by super-resolution live-cell imaging

T Nozaki, R Imai, M Tanbo, R Nagashima, S Tamura… - Molecular cell, 2017‏ - cell.com
The eukaryotic genome is organized within cells as chromatin. For proper information
output, higher-order chromatin structures can be regulated dynamically. How such structures …

[HTML][HTML] Microbiota-gut-brain axis: modulator of host metabolism and appetite

M Van de Wouw, H Schellekens, TG Dinan… - The Journal of nutrition, 2017‏ - Elsevier
The gut harbors an enormous diversity of microbes that are essential for the maintenance of
homeostasis in health and disease. A growing body of evidence supports the role of this …

Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts

CJ Walker, C Crocini, D Ramirez, AR Killaars… - Nature biomedical …, 2021‏ - nature.com
Fibrotic disease is caused by the continuous deposition of extracellular matrix by persistently
activated fibroblasts (also known as myofibroblasts), even after the resolution of the injury …

Exercise adaptations: molecular mechanisms and potential targets for therapeutic benefit

SL McGee, M Hargreaves - Nature Reviews Endocrinology, 2020‏ - nature.com
Exercise is fundamental for good health, whereas physical inactivity underpins many chronic
diseases of modern society. It is well appreciated that regular exercise improves metabolism …

Chromatin mechanics dictates subdiffusion and coarsening dynamics of embedded condensates

DSW Lee, NS Wingreen, CP Brangwynne - Biophysical Journal, 2021‏ - cell.com
DNA is organized into chromatin, a complex polymeric material which stores information and
controls gene expression. An emerging mechanism for biological organization, particularly …

[HTML][HTML] Beyond the sequence: cellular organization of genome function

T Misteli - Cell, 2007‏ - cell.com
Genomes are more than linear sequences. In vivo they exist as elaborate physical
structures, and their functional properties are strongly determined by their cellular …

The A-and B-type nuclear lamin networks: microdomains involved in chromatin organization and transcription

T Shimi, K Pfleghaar, S Kojima, CG Pack… - Genes & …, 2008‏ - genesdev.cshlp.org
The nuclear lamins function in the regulation of replication, transcription, and epigenetic
modifications of chromatin. However, the mechanisms responsible for these lamin functions …