[HTML][HTML] Infectious disease in an era of global change

RE Baker, AS Mahmud, IF Miller, M Rajeev… - Nature Reviews …, 2022 - nature.com
The twenty-first century has witnessed a wave of severe infectious disease outbreaks, not
least the COVID-19 pandemic, which has had a devastating impact on lives and livelihoods …

[HTML][HTML] The evolution of seasonal influenza viruses

VN Petrova, CA Russell - Nature Reviews Microbiology, 2018 - nature.com
Despite decades of surveillance and pharmaceutical and non-pharmaceutical interventions,
seasonal influenza viruses continue to cause epidemics around the world each year. The …

Spread of a SARS-CoV-2 variant through Europe in the summer of 2020

EB Hodcroft, M Zuber, S Nadeau, TG Vaughan… - Nature, 2021 - nature.com
Following its emergence in late 2019, the spread of SARS-CoV-2, has been tracked by
phylogenetic analysis of viral genome sequences in unprecedented detail,–. Although the …

Emergence of genomic diversity and recurrent mutations in SARS-CoV-2

L Van Dorp, M Acman, D Richard, LP Shaw… - Infection, Genetics and …, 2020 - Elsevier
SARS-CoV-2 is a SARS-like coronavirus of likely zoonotic origin first identified in December
2019 in Wuhan, the capital of China's Hubei province. The virus has since spread globally …

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

T Jombart, S Devillard, F Balloux - BMC genetics, 2010 - Springer
Background The dramatic progress in sequencing technologies offers unprecedented
prospects for deciphering the organization of natural populations in space and time …

Human seasonal influenza under COVID-19 and the potential consequences of influenza lineage elimination

V Dhanasekaran, S Sullivan, KM Edwards… - Nature …, 2022 - nature.com
Annual epidemics of seasonal influenza cause hundreds of thousands of deaths, high levels
of morbidity, and substantial economic loss. Yet, global influenza circulation has been …

Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B. 1.1. 7 emergence

MUG Kraemer, V Hill, C Ruis, S Dellicour, S Bajaj… - Science, 2021 - science.org
Understanding the causes and consequences of the emergence of severe acute respiratory
syndrome coronavirus 2 (SARS-CoV-2) variants of concern is crucial to pandemic control yet …

Prediction and prevention of the next pandemic zoonosis

SS Morse, JAK Mazet, M Woolhouse, CR Parrish… - The Lancet, 2012 - thelancet.com
Most pandemics—eg, HIV/AIDS, severe acute respiratory syndrome, pandemic influenza—
originate in animals, are caused by viruses, and are driven to emerge by ecological …

Bayesian phylogeography finds its roots

P Lemey, A Rambaut, AJ Drummond… - PLoS computational …, 2009 - journals.plos.org
As a key factor in endemic and epidemic dynamics, the geographical distribution of viruses
has been frequently interpreted in the light of their genetic histories. Unfortunately, inference …

Modeling infectious disease dynamics in the complex landscape of global health

H Heesterbeek, RM Anderson, V Andreasen, S Bansal… - Science, 2015 - science.org
BACKGROUND Despite many notable successes in prevention and control, infectious
diseases remain an enormous threat to human and animal health. The ecological and …