MLatom 3: A Platform for Machine Learning-Enhanced Computational Chemistry Simulations and Workflows
PO Dral, F Ge, YF Hou, P Zheng, Y Chen… - Journal of Chemical …, 2024 - ACS Publications
Machine learning (ML) is increasingly becoming a common tool in computational chemistry.
At the same time, the rapid development of ML methods requires a flexible software …
At the same time, the rapid development of ML methods requires a flexible software …
Energy-conserving molecular dynamics is not energy conserving
L Zhang, YF Hou, F Ge, PO Dral - Physical Chemistry Chemical …, 2023 - pubs.rsc.org
Molecular dynamics (MD) is a widely-used tool for simulating molecular and materials
properties. It is common wisdom that molecular dynamics simulations should obey physical …
properties. It is common wisdom that molecular dynamics simulations should obey physical …
Harmonic Scale Factors of Fundamental Transitions for Dispersion‐corrected Quantum Chemical Methods
This work provides a procedure and database for obtaining the vibrational frequency scale
factors that align quantum chemically computed harmonic frequencies with experimental …
factors that align quantum chemically computed harmonic frequencies with experimental …
Regularized weighted sine least-squares spectral analysis for gas electron diffraction data
DS Tikhonov - The Journal of Chemical Physics, 2023 - pubs.aip.org
Here, we present a new approach for obtaining radial distribution functions (RDF) from the
electron diffraction data using a regularized weighted sine least-squares spectral analysis. It …
electron diffraction data using a regularized weighted sine least-squares spectral analysis. It …
Describing nuclear quantum effects in vibrational properties using molecular dynamics with Wigner sampling
DS Tikhonov, YV Vishnevskiy - Physical Chemistry Chemical Physics, 2023 - pubs.rsc.org
In this work we discuss the generally applicable Wigner sampling and introduce a new,
simplified Wigner sampling method, for computationally effective modeling of molecular …
simplified Wigner sampling method, for computationally effective modeling of molecular …
Hydrogen dynamics in solid formic acid: insights from simulations with quantum colored-noise thermostats
With an increase of computational capabilities, ab initio molecular dynamics becomes the
natural choice for exploring the nuclear dynamics of solids. As based on classical …
natural choice for exploring the nuclear dynamics of solids. As based on classical …
Ground electronic state multiplicity and equilibrium molecular structure of cobalt etioporphyrin-II by gas electron diffraction experiment and quantum chemical …
The study of the electronic and geometric structure of cobalt etioporphyrin-II (CoEP-II) and
parent cobalt porphyrin (CoP) molecules was carried out using density functional theory …
parent cobalt porphyrin (CoP) molecules was carried out using density functional theory …
Heavy-element reactions database (herdb): Relativistic ab initio geometries and energies for actinide compounds
Actinide chemistry appears to be a challenge for both experimentalists and theoreticians.
Radioactivity and computational obstacles lead to a lack of heterogeneous data describing …
Radioactivity and computational obstacles lead to a lack of heterogeneous data describing …
Gas-phase structures of hemiporphyrazine and dicarbahemiporphyrazine: Key role of interactions inside coordination cavity
The structures of free hemiporphyrazine and dicarbahemiporphyrazine molecules were
determined by gas-phase electron diffraction and DFT calculations. Distance corrections (re …
determined by gas-phase electron diffraction and DFT calculations. Distance corrections (re …
Nitroxoline molecule: planar or not? A story of battle between π–π conjugation and interatomic repulsion
The conformational properties of the nitro group in nitroxoline (8-hydroxy-5-nitroquinoline,
NXN) were investigated in the gas phase by means of gas electron diffraction (GED) and …
NXN) were investigated in the gas phase by means of gas electron diffraction (GED) and …