Soil microbiome engineering for sustainability in a changing environment

JK Jansson, R McClure, RG Egbert - Nature Biotechnology, 2023 - nature.com
Recent advances in microbial ecology and synthetic biology have the potential to mitigate
damage caused by anthropogenic activities that are deleteriously impacting Earth's soil …

Application of metagenomic techniques in mining enzymes from microbial communities for biofuel synthesis

MN **ng, XZ Zhang, H Huang - Biotechnology advances, 2012 - Elsevier
Feedstock for biofuel synthesis is transitioning to lignocelluosic biomass to address criticism
over competition between first generation biofuels and food production. As microbial …

ESTHER, the database of the α/β-hydrolase fold superfamily of proteins: tools to explore diversity of functions

N Lenfant, T Hotelier, E Velluet, Y Bourne… - Nucleic acids …, 2012 - academic.oup.com
The ESTHER database, which is freely available via a web server (http://bioweb. ensam.
inra. fr/esther) and is widely used, is dedicated to proteins with an α/β-hydrolase fold, and it …

Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

A Popovic, T Hai, A Tchigvintsev, M Hajighasemi… - Scientific reports, 2017 - nature.com
Metagenomics has made accessible an enormous reserve of global biochemical diversity.
To tap into this vast resource of novel enzymes, we have screened over one million clones …

Droplet-based microfluidics for high-throughput screening of a metagenomic library for isolation of microbial enzymes

M Hosokawa, Y Hoshino, Y Nishikawa, T Hirose… - Biosensors and …, 2015 - Elsevier
This paper proposes a high-throughput, function-based screening approach of a
metagenomic library for isolating novel microbial enzymes by droplet-based microfluidics …

[HTML][HTML] A proposed update for the classification and description of bacterial lipolytic enzymes

TCA Hitch, T Clavel - PeerJ, 2019 - peerj.com
Bacterial lipolytic enzymes represent an important class of proteins: they provide their host
species with access to additional resources and have multiple applications within the …

Metagenomic mining for thermostable esterolytic enzymes uncovers a new family of bacterial esterases

D Zarafeta, D Moschidi, E Ladoukakis, S Gavrilov… - Scientific reports, 2016 - nature.com
Biocatalysts exerting activity against ester bonds have a broad range of applications in
modern biotechnology. Here, we have identified a new esterolytic enzyme by screening a …

Genomics as a potential tool to unravel the rhizosphere microbiome interactions on plant health

P Priya, B Aneesh, K Harikrishnan - Journal of Microbiological Methods, 2021 - Elsevier
Intense agricultural practices to meet rising food demands have caused ecosystem
perturbations. For sustainable crop production, biological agents are gaining attention, but …

Deciphering lignocellulose deconstruction by the white rot fungus Irpex lacteus based on genomic and transcriptomic analyses

X Qin, X Su, H Luo, R Ma, B Yao, F Ma - Biotechnology for biofuels, 2018 - Springer
Background Irpex lacteus is one of the most potent white rot fungi for biological pretreatment
of lignocellulose for second biofuel production. To elucidate the underlying molecular …

Ancestral sequence reconstruction of ancient lipase from family I. 3 bacterial lipolytic enzymes

MFAM Rozi, RNZRA Rahman, ATC Leow… - Molecular Phylogenetics …, 2022 - Elsevier
Family I. 3 lipase is distinguished from other families by the amino acid sequence and
secretion mechanism. Little is known about the evolutionary process driving these …