Computational mass spectrometry for small molecules
The identification of small molecules from mass spectrometry (MS) data remains a major
challenge in the interpretation of MS data. This review covers the computational aspects of …
challenge in the interpretation of MS data. This review covers the computational aspects of …
Accelerated isotope fine structure calculation using pruned transition trees
A fast and memory-efficient calculation of theoretical isotope patterns is crucial for the
routine interpretation of mass spectrometric data. For high-resolution experiments …
routine interpretation of mass spectrometric data. For high-resolution experiments …
IsoSpec: Hyperfast fine structure calculator
As high-resolution mass spectrometry (HRMS) becomes increasingly available, the need of
software tools capable of handling more complex data is surging. The complexity of the …
software tools capable of handling more complex data is surging. The complexity of the …
Parsing disease‐relevant protein modifications from epiphenomena: perspective on the structural basis of SOD1‐mediated ALS
Conformational change and modification of proteins are involved in many cellular functions.
However, they can also have adverse effects that are implicated in numerous diseases. How …
However, they can also have adverse effects that are implicated in numerous diseases. How …
An efficient method to calculate the aggregated isotopic distribution and exact center-masses
In this article, we present a computation-and memory-efficient method to calculate the
probabilities of occurrence and exact center-masses of the aggregated isotopic distribution …
probabilities of occurrence and exact center-masses of the aggregated isotopic distribution …
Poisson model to generate isotope distribution for biomolecules
RG Sadygov - Journal of proteome research, 2018 - ACS Publications
We introduce a simplified computational algorithm for computing isotope distributions
(relative abundances and masses) of biomolecules. The algorithm is based on Poisson …
(relative abundances and masses) of biomolecules. The algorithm is based on Poisson …
Efficient calculation of exact fine structure isotope patterns via the multidimensional Fourier transform
A Ipsen - Analytical chemistry, 2014 - ACS Publications
The isotope patterns of unknown analytes provide information that can be of great value in
their identification as part of a mass spectrometry experiment. Determining the range of …
their identification as part of a mass spectrometry experiment. Determining the range of …
Molecular isotopic distribution analysis (MIDAs) with adjustable mass accuracy
In this paper, we present Molecular Isotopic Distribution Analysis (MIDAs), a new software
tool designed to compute molecular isotopic distributions with adjustable accuracies. MIDAs …
tool designed to compute molecular isotopic distributions with adjustable accuracies. MIDAs …
Isotopic pattern recognition
H Pfaff, TJ Stratton - US Patent 10,658,165, 2020 - Google Patents
A measure of abundance is determined for an element or element combination within a
sample, the element or element combination having at least one isotopic variant. An isotopic …
sample, the element or element combination having at least one isotopic variant. An isotopic …
Current literature in mass spectrometry
John Wiley & Sons, Ltd. - 2010 - Wiley Online Library
In order to keep subscribers up‐to‐date with the latest developments in their field, John
Wiley & Sons are providing a current awareness service in each issue of the journal. The …
Wiley & Sons are providing a current awareness service in each issue of the journal. The …