The growing landscape of lysine acetylation links metabolism and cell signalling
Lysine acetylation is a conserved protein post-translational modification that links acetyl-
coenzyme A metabolism and cellular signalling. Recent advances in the identification and …
coenzyme A metabolism and cellular signalling. Recent advances in the identification and …
Weak functional constraints on phosphoproteomes
Owing to their crucial roles in regulating protein function, phosphorylation sites
(phosphosites) are expected to be evolutionarily conserved. However, mixed results …
(phosphosites) are expected to be evolutionarily conserved. However, mixed results …
Phospho. ELM: a database of phosphorylation sites—update 2011
The Phospho. ELM resource (http://phospho. elm. eu. org) is a relational database designed
to store in vivo and in vitro phosphorylation data extracted from the scientific literature and …
to store in vivo and in vitro phosphorylation data extracted from the scientific literature and …
Phosphorylation in protein-protein binding: effect on stability and function
Posttranslational modifications offer a dynamic way to regulate protein activity, subcellular
localization, and stability. Here we estimate the effect of phosphorylation on protein binding …
localization, and stability. Here we estimate the effect of phosphorylation on protein binding …
Deciphering a global network of functionally associated post‐translational modifications
Various post‐translational modifications (PTMs) fine‐tune the functions of almost all
eukaryotic proteins, and co‐regulation of different types of PTMs has been shown within and …
eukaryotic proteins, and co‐regulation of different types of PTMs has been shown within and …
Systematic analysis of protein phosphorylation networks from phosphoproteomic data
In eukaryotes, hundreds of protein kinases (PKs) specifically and precisely modify
thousands of substrates at specific amino acid residues to faithfully orchestrate numerous …
thousands of substrates at specific amino acid residues to faithfully orchestrate numerous …
Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs
Protein (de) phosphorylation plays an important role in plants. To provide a robust
foundation for subcellular phosphorylation signaling network analysis and kinase-substrate …
foundation for subcellular phosphorylation signaling network analysis and kinase-substrate …
Comparative analysis of gene regulatory networks: from network reconstruction to evolution
D Thompson, A Regev, S Roy - Annual review of cell and …, 2015 - annualreviews.org
Regulation of gene expression is central to many biological processes. Although
reconstruction of regulatory circuits from genomic data alone is therefore desirable, this …
reconstruction of regulatory circuits from genomic data alone is therefore desirable, this …
Perspectives for glyco-engineering of recombinant biopharmaceuticals from microalgae
Microalgae exhibit great potential for recombinant therapeutic protein production, due to
lower production costs, immunity to human pathogens, and advanced genetic toolkits …
lower production costs, immunity to human pathogens, and advanced genetic toolkits …
Proteotype coevolution and quantitative diversity across 11 mammalian species
Evolutionary profiling has been largely limited to the nucleotide level. Using consistent
proteomic methods, we quantified proteomic and phosphoproteomic layers in fibroblasts …
proteomic methods, we quantified proteomic and phosphoproteomic layers in fibroblasts …