[HTML][HTML] Atg8-family proteins—structural features and molecular interactions in autophagy and beyond

N Wesch, V Kirkin, VV Rogov - Cells, 2020 - mdpi.com
Autophagy is a common name for a number of catabolic processes, which keep the cellular
homeostasis by removing damaged and dysfunctional intracellular components. Impairment …

The Intricate Balance between Life and Death: ROS, cathepsins, and their interplay in cell death and autophagy

MV Voronina, AS Frolova, EP Kolesova… - International Journal of …, 2024 - mdpi.com
Cellular survival hinges on a delicate balance between accumulating damages and repair
mechanisms. In this intricate equilibrium, oxidants, currently considered physiological …

Autophagosome membrane expansion is mediated by the N-terminus and cis-membrane association of human ATG8s

W Zhang, T Nishimura, D Gahlot, C Saito, C Davis… - Elife, 2023 - elifesciences.org
Autophagy is an essential catabolic pathway which sequesters and engulfs cytosolic
substrates via autophagosomes, unique double-membraned structures. ATG8 proteins are …

RosettaDDGPrediction for high‐throughput mutational scans: From stability to binding

V Sora, AO Laspiur, K Degn, M Arnaudi… - Protein …, 2023 - Wiley Online Library
Reliable prediction of free energy changes upon amino acid substitutions (ΔΔ G s) is crucial
to investigate their impact on protein stability and protein–protein interaction. Advances in …

Cytoplasmic short linear motifs in ACE2 and integrin β3 link SARS-CoV-2 host cell receptors to mediators of endocytosis and autophagy

J Kliche, H Kuss, M Ali, Y Ivarsson - Science signaling, 2021 - science.org
The spike protein of SARS-CoV-2 binds the angiotensin-converting enzyme 2 (ACE2) on the
host cell surface and subsequently enters host cells through receptor-mediated endocytosis …

Endocytosis and transcytosis of SARS-CoV-2 across the intestinal epithelium and other tissue barriers

E Knyazev, S Nersisyan, A Tonevitsky - Frontiers in Immunology, 2021 - frontiersin.org
Since 2003, the world has been confronted with three new betacoronaviruses that cause
human respiratory infections: SARS-CoV, which causes severe acute respiratory syndrome …

Over fifty years of life, death, and cannibalism: a historical recollection of apoptosis and autophagy

M Izadi, TA Ali, E Pourkarimi - International journal of molecular sciences, 2021 - mdpi.com
Research in biomedical sciences has changed dramatically over the past fifty years. There is
no doubt that the discovery of apoptosis and autophagy as two highly synchronized and …

[HTML][HTML] Ferritinophagy and α-Synuclein: pharmacological targeting of autophagy to restore iron regulation in Parkinson's disease

MK Boag, A Roberts, VN Uversky, L Ma… - International journal of …, 2022 - mdpi.com
A major hallmark of Parkinson's disease (PD) is the fatal destruction of dopaminergic
neurons within the substantia nigra pars compacta. This event is preceded by the formation …

Ksp1 is an autophagic receptor protein for the Snx4-assisted autophagy of Ssn2/Med13

SE Hanley, SD Willis, SJ Doyle, R Strich, KF Cooper - Autophagy, 2024 - Taylor & Francis
Ksp1 is a casein II-like kinase whose activity prevents aberrant macroautophagy/autophagy
induction in nutrient-rich conditions in yeast. Here, we describe a kinase-independent role of …

Nerve growth factor (NGF) with hypoxia response elements loaded by adeno-associated virus (AAV) combined with neural stem cells improve the spinal cord injury …

Q Wu, Z **ang, Y Ying, Z Huang, Y Tu, M Chen… - Cell Death …, 2021 - nature.com
The ischemia and hypoxia microenvironment after spinal cord injury (SCI) makes SCI repair
a challenging problem. With various stimulus, chances for neural stem cells (NSCs) to …