Microdiversity shapes the traits, niche space, and biogeography of microbial taxa

AA Larkin, AC Martiny - Environmental microbiology reports, 2017 - Wiley Online Library
With rapidly improving sequencing technologies, scientists have recently gained the ability
to examine diverse microbial communities at high genomic resolution, revealing that both …

[HTML][HTML] Beneficial Effect and Potential Risk of Pantoea on Rice Production

L Lv, J Luo, T Ahmed, HEM Zaki, Y Tian, MS Shahid… - Plants, 2022 - mdpi.com
Bacteria from the genus Pantoea have been reported to be widely distributed in rice paddy
environments with contradictory roles. Some strains promoted rice growth and protected rice …

Engineering broad-spectrum bacterial blight resistance by simultaneously disrupting variable TALE-binding elements of multiple susceptibility genes in rice

Z Xu, X Xu, Q Gong, Z Li, Y Li, S Wang, Y Yang, W Ma… - Molecular plant, 2019 - cell.com
Xanthomonas oryzae pv. oryzae (Xoo), the causal agent of bacterial blight of rice, employs
the transcription activator-like effectors (TALEs) to induce the expression of the OsSWEET …

Advances on plant–pathogen interactions from molecular toward systems biology perspectives

R Peyraud, U Dubiella, A Barbacci, S Genin… - The Plant …, 2017 - Wiley Online Library
In the past 2 decades, progress in molecular analyses of the plant immune system has
revealed key elements of a complex response network. Current paradigms depict the …

Introducing SPeDE: High-throughput dereplication and accurate determination of microbial diversity from matrix-assisted laser desorption–ionization time of flight …

C Dumolin, M Aerts, B Verheyde, S Schellaert… - Msystems, 2019 - journals.asm.org
The isolation of microorganisms from microbial community samples often yields a large
number of conspecific isolates. Increasing the diversity covered by an isolate collection …

Effect of Plant-Growth-Promoting Fungi on Eggplant (Solanum melongena L.) in New Reclamation Land

X Li, D Li, J Yan, Y Zhang, H Wang, J Zhang, T Ahmed… - Agriculture, 2021 - mdpi.com
Land reclamation may expand the supply of usable land for food security. Immature soil is
not suitable for plant growth and needs to be amended by the addition of organic matter and …

In-depth genome analysis of Bacillus sp. BH32, a salt stress-tolerant endophyte obtained from a halophyte in a semiarid region

HA Belaouni, S Compant, L Antonielli, B Nikolic… - Applied Microbiology …, 2022 - Springer
Endophytic strains belonging to the Bacillus cereus group were isolated from the halophytes
Atriplex halimus L.(Amaranthaceae) and Tamarix aphylla L.(Tamaricaceae) from costal and …

Transmission in the origins of bacterial diversity, from ecotypes to phyla

FM Cohan - Microbial Transmission, 2019 - Wiley Online Library
In recent decades, microbiologists have discovered an astounding disparity of prokaryotic
life. Our field has identified the most anciently divergent prokaryotic lineages, and we have …

Within-Species Genomic Variation and Variable Patterns of Recombination in the Tetracycline Producer Streptomyces rimosus

CJ Park, CP Andam - Frontiers in microbiology, 2019 - frontiersin.org
Streptomyces rimosus is best known as the primary source of the tetracycline class of
antibiotics, most notably oxytetracycline, which have been widely used against many gram …