Modern perspectives on near-equilibrium analysis of Turing systems

AL Krause, EA Gaffney… - … Transactions of the …, 2021 - royalsocietypublishing.org
In the nearly seven decades since the publication of Alan Turing's work on morphogenesis,
enormous progress has been made in understanding both the mathematical and biological …

Bridging from single to collective cell migration: A review of models and links to experiments

A Buttenschön, L Edelstein-Keshet - PLoS computational biology, 2020 - journals.plos.org
Mathematical and computational models can assist in gaining an understanding of cell
behavior at many levels of organization. Here, we review models in the literature that focus …

[BUCH][B] Numerical continuation and bifurcation in Nonlinear PDEs

H Uecker - 2021 - SIAM
In this book we consider solution branches and bifurcations in nonlinear partial differential
equations (PDEs) as models from science (and some economics). Given a nonlinear PDE …

Phase-space geometry of mass-conserving reaction-diffusion dynamics

F Brauns, J Halatek, E Frey - Physical Review X, 2020 - APS
Experimental studies of protein-pattern formation have stimulated new interest in the
dynamics of reaction-diffusion systems. However, a comprehensive theoretical …

Sensing the shape of a cell with reaction diffusion and energy minimization

AR Singh, T Leadbetter… - Proceedings of the …, 2022 - National Acad Sciences
Some dividing cells sense their shape by becoming polarized along their long axis. Cell
polarity is controlled in part by polarity proteins, like Rho GTPases, cycling between active …

Forced and spontaneous symmetry breaking in cell polarization

PW Miller, D Fortunato, C Muratov… - Nature computational …, 2022 - nature.com
How does breaking the symmetry of an equation alter the symmetry of its solutions? Here,
we systematically examine how reducing underlying symmetries from spherical to …

Phytoplankton competition for nutrients and light in a stratified lake: a mathematical model connecting epilimnion and hypolimnion

J Zhang, JD Kong, J Shi, H Wang - Journal of Nonlinear Science, 2021 - Springer
A mathematical model connecting epilimnion and hypolimnion is proposed to describe the
competition of phytoplankton for nutrients and light in a stratified lake. The existence and …

Bulk-surface coupling: derivation of two models

J Li, L Su, X Wang, Y Wang - Journal of Differential Equations, 2021 - Elsevier
Motivated by various physical, cellular and ecological applications, there has been a recent
resurgence of interest in studying the boundary adsorption-desorption of diffusive …

Pattern formation in a coupled membrane-bulk reaction-diffusion model for intracellular polarization and oscillations

F Paquin-Lefebvre, B Xu, KL DiPietro… - Journal of Theoretical …, 2020 - Elsevier
Reaction-diffusion systems have been widely used to study spatio-temporal phenomena in
cell biology, such as cell polarization. Coupled bulk-surface models naturally include …

Pattern localization to a domain edge

MC Wigbers, F Brauns, T Hermann, E Frey - Physical Review E, 2020 - APS
The formation of protein patterns inside cells is generically described by reaction-diffusion
models. The study of such systems goes back to Turing, who showed how patterns can …