Kinetics from metadynamics: Principles, applications, and outlook

D Ray, M Parrinello - Journal of Chemical Theory and …, 2023 - ACS Publications
Metadynamics is a popular enhanced sampling algorithm for computing the free energy
landscape of rare events by using molecular dynamics simulation. Ten years ago, Tiwary …

Supramolecular polymers–we've come full circle

T Aida, EW Meijer - Israel Journal of Chemistry, 2020 - Wiley Online Library
Since the first polymers were discovered, scientists have debated their structures. Before
Hermann Staudinger published the brilliant concept of macromolecules, polymer properties …

Martini 3: a general purpose force field for coarse-grained molecular dynamics

PCT Souza, R Alessandri, J Barnoud, S Thallmair… - Nature …, 2021 - nature.com
The coarse-grained Martini force field is widely used in biomolecular simulations. Here we
present the refined model, Martini 3 (http://cgmartini. nl), with an improved interaction …

Self-assembled poly-catenanes from supramolecular toroidal building blocks

S Datta, Y Kato, S Higashiharaguchi, K Aratsu, A Isobe… - Nature, 2020 - nature.com
Mechanical interlocking of molecules (catenation) is a nontrivial challenge in modern
synthetic chemistry and materials science,. One strategy to achieve catenation is the design …

Multistep, site-selective noncovalent synthesis of two-dimensional block supramolecular polymers

N Sasaki, J Kikkawa, Y Ishii, T Uchihashi, H Imamura… - Nature Chemistry, 2023 - nature.com
Although the principles of noncovalent bonding are well understood and form the basis for
the syntheses of many intricate supramolecular structures, supramolecular noncovalent …

Self-sorted, random, and block supramolecular copolymers via sequence controlled, multicomponent self-assembly

A Sarkar, R Sasmal, C Empereur-Mot… - Journal of the …, 2020 - ACS Publications
Multicomponent supramolecular copolymerization promises to construct complex
nanostructures with emergent properties. However, even with two monomeric components …

Controlling the length of porphyrin supramolecular polymers via coupled equilibria and dilution-induced supramolecular polymerization

E Weyandt, L Leanza, R Capelli, GM Pavan… - Nature …, 2022 - nature.com
Multi-component systems often display convoluted behavior, pathway complexity and
coupled equilibria. In recent years, several ways to control complex systems by manipulating …

Synthesis of C60/[10]CPP‐Catenanes by Regioselective, Nanocapsule‐Templated Bingel Bis‐Addition

FM Steudel, E Ubasart, L Leanza… - Angewandte Chemie …, 2023 - Wiley Online Library
The addition of two unsymmetric malonate esters to the Buckminster fullerene C60 can lead
to 22 spectroscopically distinguishable isomeric products and therefore represents a …

The martini model in materials science

R Alessandri, F Grünewald, SJ Marrink - Advanced Materials, 2021 - Wiley Online Library
The Martini model, a coarse‐grained force field initially developed with biomolecular
simulations in mind, has found an increasing number of applications in the field of soft …

Therapeutic supramolecular polymers: Designs and applications

H Wang, J Mills, B Sun, H Cui - Progress in polymer science, 2024 - Elsevier
The self-assembly of low-molecular-weight building motifs into supramolecular polymers
has unlocked a new realm of materials with distinct properties and tremendous potential for …