Rethinking drug design in the artificial intelligence era
Artificial intelligence (AI) tools are increasingly being applied in drug discovery. While some
protagonists point to vast opportunities potentially offered by such tools, others remain …
protagonists point to vast opportunities potentially offered by such tools, others remain …
Unraveling the role of linker design in proteolysis targeting chimeras: Miniperspective
A current bottleneck in the development of proteolysis targeting chimeras (PROTACs) is the
empirical nature of linker length structure–activity relationships (SARs). A multidisciplinary …
empirical nature of linker length structure–activity relationships (SARs). A multidisciplinary …
The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands
C Southan, JL Sharman, HE Benson… - Nucleic acids …, 2016 - academic.oup.com
Abstract The IUPHAR/BPS Guide to PHARMACOLOGY (GtoPdb, http://www.
guidetopharmacology. org) provides expert-curated molecular interactions between …
guidetopharmacology. org) provides expert-curated molecular interactions between …
Recent advances of SHP2 inhibitors in cancer therapy: current development and clinical application
X Yuan, H Bu, J Zhou, CY Yang… - Journal of medicinal …, 2020 - ACS Publications
SHP2 (Src homology-2 domain-containing protein tyrosine phosphatase-2) is a non-
receptor protein tyrosine phosphatase that removes tyrosine phosphorylation. Functionally …
receptor protein tyrosine phosphatase that removes tyrosine phosphorylation. Functionally …
Making sense of large-scale kinase inhibitor bioactivity data sets: a comparative and integrative analysis
We carried out a systematic evaluation of target selectivity profiles across three recent large-
scale biochemical assays of kinase inhibitors and further compared these standardized …
scale biochemical assays of kinase inhibitors and further compared these standardized …
Fs-mol: A few-shot learning dataset of molecules
Small datasets are ubiquitous in drug discovery as data generation is expensive and can be
restricted for ethical reasons (eg in vivo experiments). A widely applied technique in early …
restricted for ethical reasons (eg in vivo experiments). A widely applied technique in early …
Active targeting drug delivery nanocarriers: Ligands
FS Anarjan - Nano-Structures & Nano-Objects, 2019 - Elsevier
There are two kinds of targeted drug delivery systems:(I) Active targeted drug delivery (smart
drug delivery) based on ligands affiliation to receptors,(II) Passive targeted drug delivery …
drug delivery) based on ligands affiliation to receptors,(II) Passive targeted drug delivery …
Trust, but verify II: a practical guide to chemogenomics data curation
There is a growing public concern about the lack of reproducibility of experimental data
published in peer-reviewed scientific literature. Herein, we review the most recent alerts …
published in peer-reviewed scientific literature. Herein, we review the most recent alerts …
Is target-based drug discovery efficient? Discovery and “off-target” mechanisms of all drugs
A Sadri - Journal of medicinal chemistry, 2023 - ACS Publications
Target-based drug discovery is the dominant paradigm of drug discovery; however, a
comprehensive evaluation of its real-world efficiency is lacking. Here, a manual systematic …
comprehensive evaluation of its real-world efficiency is lacking. Here, a manual systematic …
[HTML][HTML] Mechanistic enzymology in drug discovery: a fresh perspective
Given the therapeutic and commercial success of small-molecule enzyme inhibitors, as
exemplified by kinase inhibitors in oncology, a major focus of current drug-discovery and …
exemplified by kinase inhibitors in oncology, a major focus of current drug-discovery and …