Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs)

FX Theillet, A Binolfi, T Frembgen-Kesner… - Chemical …, 2014 - ACS Publications
It has long been axiomatic that a protein's structure determines its function. Intrinsically
disordered proteins (IDPs) and disordered protein regions (IDRs) defy this structure …

Soft interactions and crowding

M Sarkar, C Li, GJ Pielak - Biophysical reviews, 2013 - Springer
The intracellular milieu is complex, heterogeneous and crowded—an environment vastly
different from dilute solutions in which most biophysical studies are performed. The crowded …

Diffusion, crowding & protein stability in a dynamic molecular model of the bacterial cytoplasm

SR McGuffee, AH Elcock - PLoS computational biology, 2010 - journals.plos.org
A longstanding question in molecular biology is the extent to which the behavior of
macromolecules observed in vitro accurately reflects their behavior in vivo. A number of …

Effects of proteins on protein diffusion

Y Wang, C Li, GJ Pielak - Journal of the American Chemical …, 2010 - ACS Publications
Despite increased attention, little is known about how the crowded intracellular environment
affects basic phenomena like protein diffusion. Here, we use NMR to quantify the rotational …

Cisplatin binding to proteins: A structural perspective

L Messori, A Merlino - Coordination Chemistry Reviews, 2016 - Elsevier
The interactions of clinically established anticancer Pt-based drugs with proteins play crucial
roles in Pt cellular uptake and biodistribution, as well as in determining side effects and …

Impact of reconstituted cytosol on protein stability

M Sarkar, AE Smith, GJ Pielak - Proceedings of the National Academy of …, 2013 - pnas.org
Protein stability is usually studied in simple buffered solutions, but most proteins function
inside cells, where the heterogeneous and crowded environment presents a complex …

Protein 19F NMR in Escherichia coli

C Li, GF Wang, Y Wang, R Creager-Allen… - Journal of the …, 2010 - ACS Publications
Although overexpression and 15N enrichment facilitate the observation of resonances from
disordered proteins in Escherichia coli, 15N enrichment alone is insufficient for detecting …

Protein folding in the cell: challenges and progress

A Gershenson, LM Gierasch - Current opinion in structural biology, 2011 - Elsevier
It is hard to imagine a more extreme contrast than that between the dilute solutions used for
in vitro studies of protein folding and the crowded, compartmentalized, sticky, spatially …