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A field guide to eukaryotic transposable elements
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Causes and consequences of varying transposable element activity: An evolutionary perspective
Transposable elements (TEs) are genomic parasites found in nearly all eukaryotes,
including humans. This evolutionary success of TEs is due to their replicative activity …
including humans. This evolutionary success of TEs is due to their replicative activity …
Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression
There is considerable interest in understanding the effect of transposable elements (TEs) on
embryonic development. Studies in humans and mice are limited by the difficulty of working …
embryonic development. Studies in humans and mice are limited by the difficulty of working …
HiTE: a fast and accurate dynamic boundary adjustment approach for full-length transposable element detection and annotation
Recent advancements in genome assembly have greatly improved the prospects for
comprehensive annotation of Transposable Elements (TEs). However, existing methods for …
comprehensive annotation of Transposable Elements (TEs). However, existing methods for …
Transposable element expansion and low-level piRNA silencing in grasshoppers may cause genome gigantism
X Liu, M Majid, H Yuan, H Chang, L Zhao, Y Nie, L He… - BMC biology, 2022 - Springer
Abstract Background Transposable elements (TEs) have been likened to parasites in the
genome that reproduce and move ceaselessly in the host, continuously enlarging the host …
genome that reproduce and move ceaselessly in the host, continuously enlarging the host …
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in …
Z Xu, T Gao, Y Xu, X Li, J Li, H Lin, W Yan, J Pan… - Genomics, 2021 - Elsevier
Red swamp crayfish Procambarus clarkii is an ecologically and economically important
crustacean species. Here, based on a de novo assembly strategy combining PacBio with Hi …
crustacean species. Here, based on a de novo assembly strategy combining PacBio with Hi …
[HTML][HTML] The structural, functional and evolutionary impact of transposable elements in eukaryotes
Transposable elements (TEs) are nearly ubiquitous in eukaryotes. The increase in genomic
data, as well as progress in genome annotation and molecular biology techniques, have …
data, as well as progress in genome annotation and molecular biology techniques, have …
[HTML][HTML] Factors regulating the activity of LINE1 retrotransposons
MS Protasova, TV Andreeva, EI Rogaev - Genes, 2021 - mdpi.com
LINE-1 (L1) is a class of autonomous mobile genetic elements that form somatic mosaicisms
in various tissues of the organism. The activity of L1 retrotransposons is strictly controlled by …
in various tissues of the organism. The activity of L1 retrotransposons is strictly controlled by …
Myriapod genomes reveal ancestral horizontal gene transfer and hormonal gene loss in millipedes
Animals display a fascinating diversity of body plans. Correspondingly, genomic analyses
have revealed dynamic evolution of gene gains and losses among animal lineages. Here …
have revealed dynamic evolution of gene gains and losses among animal lineages. Here …
New insights into the evolutionary dynamic and lineage divergence of gasdermin E in metazoa
Z Yuan, S Jiang, K Qin, L Sun - Frontiers in Cell and Developmental …, 2022 - frontiersin.org
Gasdermin (GSDM) is a family of pore-forming proteins that induce pyroptosis. To date, the
origin and evolution of GSDM in Metazoa remain elusive. Here, we found that GSDM …
origin and evolution of GSDM in Metazoa remain elusive. Here, we found that GSDM …