A renaissance of neural networks in drug discovery

II Baskin, D Winkler, IV Tetko - Expert opinion on drug discovery, 2016 - Taylor & Francis
Introduction: Neural networks are becoming a very popular method for solving machine
learning and artificial intelligence problems. The variety of neural network types and their …

[HTML][HTML] Artificial neural networks for computer-based molecular design

G Schneider, P Wrede - Progress in biophysics and molecular biology, 1998 - Elsevier
The theory of artificial neural networks is briefly reviewed focusing on supervised and
unsupervised techniques which have great impact on current chemical applications. An …

Extensions of the Wiener number

HY Zhu, DJ Klein, I Lukovits - Journal of chemical information and …, 1996 - ACS Publications
Particularly for structure− property correlations there are many chemical graph-theoretic
indices, one of which is Wiener's “path number”. Because Wiener's original work focused on …

Substructural fragments: an universal language to encode reactions, molecular and supramolecular structures

A Varnek, D Fourches, F Hoonakker… - Journal of computer-aided …, 2005 - Springer
Substructural fragments are proposed as a simple and safe way to encode molecular
structures in a matrix containing the occurrence of fragments of a given type. The knowledge …

The signature molecular descriptor. 1. Using extended valence sequences in QSAR and QSPR studies

JL Faulon, DP Visco, RS Pophale - Journal of chemical …, 2003 - ACS Publications
We present a new descriptor named signature based on extended valence sequence. The
signature of an atom is a canonical representation of the atom's environment up to a …

The whole is bigger than the sum of its parts: drug transport in the context of two membranes with active efflux

VV Rybenkov, HI Zgurskaya, C Ganguly… - Chemical …, 2021 - ACS Publications
Cell envelope plays a dual role in the life of bacteria by simultaneously protecting it from a
hostile environment and facilitating access to beneficial molecules. At the heart of this ability …

A neural device for searching direct correlations between structures and properties of chemical compounds

II Baskin, VA Palyulin, NS Zefirov - Journal of chemical information …, 1997 - ACS Publications
A scheme of a neural device intended for searching direct correlations between structures
and properties of organic compounds without preliminary computation of molecular …

Fragmental approach in QSPR

NS Zefirov, VA Palyulin - Journal of chemical information and …, 2002 - ACS Publications
Methodological problems of using fragmental descriptors for construction of QSAR/QSPR
equations are considered, and the main achievements in this field are summarized and …

Speeding up early drug discovery in antiviral research: a fragment-based in silico approach for the design of virtual anti-hepatitis C leads

A Speck-Planche… - ACS Combinatorial …, 2017 - ACS Publications
Hepatitis C constitutes an unresolved global health problem. This infectious disease is
caused by the hepatotropic hepatitis C virus (HCV), and it can lead to the occurrence of life …

Cell-based multi-target QSAR model for design of virtual versatile inhibitors of liver cancer cell lines

VV Kleandrova, MT Scotti, L Scotti… - SAR and QSAR in …, 2020 - Taylor & Francis
Liver cancers are one of the leading fatal diseases among malignant neoplasms. Current
chemotherapeutic treatments used to fight these illnesses have become less efficient in …