Interpreting omics data with pathway enrichment analysis
Pathway enrichment analysis is indispensable for interpreting omics datasets and
generating hypotheses. However, the foundations of enrichment analysis remain elusive to …
generating hypotheses. However, the foundations of enrichment analysis remain elusive to …
A brief survey of tools for genomic regions enrichment analysis
Functional enrichment analysis or pathway enrichment analysis (PEA) is a bioinformatics
technique which identifies the most over-represented biological pathways in a list of genes …
technique which identifies the most over-represented biological pathways in a list of genes …
Eleven quick tips for data cleaning and feature engineering
Applying computational statistics or machine learning methods to data is a key component of
many scientific studies, in any field, but alone might not be sufficient to generate robust and …
many scientific studies, in any field, but alone might not be sufficient to generate robust and …
Ten quick tips for avoiding pitfalls in multi-omics data integration analyses
Data are the most important elements of bioinformatics: Computational analysis of
bioinformatics data, in fact, can help researchers infer new knowledge about biology …
bioinformatics data, in fact, can help researchers infer new knowledge about biology …
Ten quick tips for computational analysis of medical images
Medical imaging is a great asset for modern medicine, since it allows physicians to spatially
interrogate a disease site, resulting in precise intervention for diagnosis and treatment, and …
interrogate a disease site, resulting in precise intervention for diagnosis and treatment, and …
Eight quick tips for biologically and medically informed machine learning
Machine learning has become a powerful tool for computational analysis in the biomedical
sciences, with its effectiveness significantly enhanced by integrating domain-specific …
sciences, with its effectiveness significantly enhanced by integrating domain-specific …
Ten quick tips for bioinformatics analyses using an Apache Spark distributed computing environment
Some scientific studies involve huge amounts of bioinformatics data that cannot be analyzed
on personal computers usually employed by researchers for day-to-day activities but rather …
on personal computers usually employed by researchers for day-to-day activities but rather …
Seven quick tips for gene-focused computational pangenomic analysis
Pangenomics is a relatively new scientific field which investigates the union of all the
genomes of a clade. The word pan means everything in ancient Greek; the term …
genomes of a clade. The word pan means everything in ancient Greek; the term …
Combined inhibition of EZH2 and CDK4/6 perturbs endoplasmic reticulum-mitochondrial homeostasis and increases antitumor activity against glioblastoma
T Freitag, P Kaps, J Ramtke, S Bertels, E Zunke… - NPJ Precision …, 2024 - nature.com
Here, we show that combined use of the EZH2 inhibitor GSK126 and the CDK4/6 inhibitor
abemaciclib synergistically enhances antitumoral effects in preclinical GBM models. Dual …
abemaciclib synergistically enhances antitumoral effects in preclinical GBM models. Dual …
Chronic inflammation degrades CD4 T cell immunity to prior vaccines in treated HIV infection
M Kießling, JJ Cole, S Kübel, P Klein, K Korn… - Nature …, 2024 - nature.com
To date, our understanding of how HIV infection impacts vaccine-induced cellular immunity
is limited. Here, we investigate inflammation, immune activation and antigen-specific T cell …
is limited. Here, we investigate inflammation, immune activation and antigen-specific T cell …