Microbiome data, metadata and analytical workflows have become 'big'in terms of volume
and complexity. Although the infrastructure and technologies to share data have been …

The discovery of the size and complexity of the human microbiome has resulted in an
ongoing reevaluation of many concepts of health and disease, including diseases affecting …

The cryptic lifestyle of most fungi necessitates molecular identification of the guild in
environmental studies. Over the past decades, rapid development and affordability of …

Microorganisms living inside plants can promote plant growth and health, but their genomic
and functional diversity remain largely elusive. Here, metagenomics and network inference …

We present QIIME 2, an opensource microbiome data science platform accessible to users
spanning the microbiome research ecosystem, from scientists and engineers to clinicians …

Abstract Global Natural Product Social Molecular Networking (GNPS) is an interactive online
small molecule–focused tandem mass spectrometry (MS2) data curation and analysis …

Differential abundance analysis is controversial throughout microbiome research. Gold
standard approaches require laborious measurements of total microbial load, or absolute …

Dysbiosis, departure of the gut microbiome from a healthy state, has been suggested to be a
powerful biomarker of disease incidence and progression,–. Diagnostic applications have …

To the Editor—Rapid advances in DNA-sequencing and bioinformatics technologies in the
past two decades have substantially improved understanding of the microbial world. This …

Our growing awareness of the microbial world's importance and diversity contrasts starkly
with our limited understanding of its fundamental structure. Despite recent advances in DNA …