Life and death in the soil microbiome: how ecological processes influence biogeochemistry

NW Sokol, E Slessarev, GL Marschmann… - Nature Reviews …, 2022 - nature.com
Soil microorganisms shape global element cycles in life and death. Living soil
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …

Deep-C storage: Biological, chemical and physical strategies to enhance carbon stocks in agricultural subsoils

ES Button, J Pett-Ridge, DV Murphy, Y Kuzyakov… - Soil Biology and …, 2022 - Elsevier
Due to their substantial volume, subsoils contain more of the total soil carbon (C) pool than
topsoils. Much of this C is thousands of years old, suggesting that subsoils offer …

Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes

A Gavriilidou, SA Kautsar, N Zaburannyi, D Krug… - Nature …, 2022 - nature.com
Bacterial specialized metabolites are a proven source of antibiotics and cancer therapies,
but whether we have sampled all the secondary metabolite chemical diversity of cultivated …

The deep soil organic carbon response to global change

CE Hicks Pries, R Ryals, B Zhu, K Min… - Annual Review of …, 2023 - annualreviews.org
Over 70% of soil organic carbon (SOC) is stored at a depth greater than 20 cm belowground.
A portion of this deep SOC actively cycles on annual to decadal timescales and is sensitive …

[HTML][HTML] Soil metabolomics-current challenges and future perspectives

RW Brown, MK Reay, F Centler, DR Chadwick… - Soil Biology and …, 2024 - Elsevier
Soil is an extremely complex and dynamic matrix, in part, due to the wide diversity of
organisms living within it. Soil organic matter (SOM) is the fundamental substrate on which …

A vast repertoire of secondary metabolites potentially influences community dynamics and biogeochemical processes in cold seeps

X Dong, T Zhang, W Wu, Y Peng, X Liu, Y Han… - Science …, 2024 - science.org
In deep-sea cold seeps, microbial communities thrive on the geological seepage of
hydrocarbons and inorganic compounds, differing from photosynthetically driven …

Biosynthetic potential of uncultured Antarctic soil bacteria revealed through long-read metagenomic sequencing

V Waschulin, C Borsetto, R James… - The ISME …, 2022 - academic.oup.com
The growing problem of antibiotic resistance has led to the exploration of uncultured
bacteria as potential sources of new antimicrobials. PCR amplicon analyses and short-read …

Bacillus spp. as bio-factories for antifungal secondary metabolites: Innovation beyond whole organism formulations

B Salazar, A Ortiz, C Keswani, T Minkina… - Microbial Ecology, 2023 - Springer
Several fungi act as parasites for crops causing huge annual crop losses at both pre-and
post-harvest stages. For years, chemical fungicides were the solution; however, their wide …

Bacteria as a treasure house of secondary metabolites with anticancer potential

CD Mohan, S Rangappa, SC Nayak… - Seminars in cancer …, 2022 - Elsevier
Cancer stands in the frontline among leading killers worldwide and the annual mortality rate
is expected to reach 16.4 million by 2040. Humans suffer from about 200 different types of …

Sculpting the soil microbiota

V Custódio, M Gonin, G Stabl, N Bakhoum… - The Plant …, 2022 - Wiley Online Library
Soil is a living ecosystem, the health of which depends on fine interactions among its abiotic
and biotic components. These form a delicate equilibrium maintained through a multilayer …