Advances of reverse vaccinology for mRNA vaccine design against SARS-CoV-2: a review of methods and tools

MK da Silva, DMO Campos, S Akash, S Akter, LC Yee… - Viruses, 2023 - mdpi.com
mRNA vaccines are a new class of vaccine that can induce potent and specific immune
responses against various pathogens. However, the design of mRNA vaccines requires the …

Revisiting the dimensions of universal vaccine with special focus on COVID-19: Efficacy versus methods of designing

P Jaishwal, K Jha, SP Singh - International Journal of Biological …, 2024 - Elsevier
Even though the use of SARS-CoV-2 vaccines during the COVID-19 pandemic showed
unprecedented success in a short time, it also exposed a flaw in the current vaccine design …

Investigation of the MDM2-binding potential of de novo designed peptides using enhanced sampling simulations

OA Durojaye, AA Yekeen, MO Idris, NO Okoro… - International Journal of …, 2024 - Elsevier
The tumor suppressor p53 plays a crucial role in cellular responses to various stresses,
regulating key processes such as apoptosis, senescence, and DNA repair. Dysfunctional …

MasitinibL shows promise as a drug-like analog of masitinib that elicits comparable SARS-Cov-2 3CLpro inhibition with low kinase preference

OA Durojaye, NO Okoro, AS Odiba, BC Nwanguma - Scientific Reports, 2023 - nature.com
SARS-CoV-2 infection has led to several million deaths worldwide and ravaged the
economies of many countries. Hence, develo** therapeutics against SARS-CoV-2 …

Delineation of the CENP-LN sub-complex dissociation mechanism upon multisite phosphorylation during mitosis

OA Durojaye - Journal of Biomolecular Structure and Dynamics, 2024 - Taylor & Francis
Phosphorylation is the most prevalent form of regulation in cells, organizing virtually all
cellular functions, including survival, motility, differentiation, proliferation, and metabolism …

The advantage of using immunoinformatic tools on vaccine design and development for coronavirus

J García-Machorro, GL Ramírez-Salinas… - Vaccines, 2022 - mdpi.com
After the outbreak of SARS-CoV-2 by the end of 2019, the vaccine development strategies
became a worldwide priority. Furthermore, the appearances of novel SARS-CoV-2 variants …

Computer-aided molecular modeling and structural analysis of the human centromere protein–HIKM complex

HO Uzoeto, S Cosmas, JN Ajima, AV Arazu… - Beni-Suef University …, 2022 - Springer
Background Protein–peptide and protein–protein interactions play an essential role in
different functional and structural cellular organizational aspects. While Cryo-EM and X-ray …

Design of multi-epitope-based therapeutic vaccine candidates from HBc and HBx proteins of hepatitis B virus using reverse vaccinology and immunoinformatics …

PG Naully, MI Tan, H Nugrahapraja, AA Artarini… - PloS one, 2024 - journals.plos.org
The major problem in cases of chronic hepatitis B (CHB) is the failure of the patient's
immune response to eliminate the covalently closed circular DNA (cccDNA) …

Immunology to Immunotherapeutics of SARS-CoV-2: Identification of Immunogenic Epitopes for Vaccine Development

A Pandey, R Madan, S Singh - Current Microbiology, 2022 - Springer
The emergence of COVID19 pandemic caused by SARS-CoV-2 virus has created a global
public health and socio-economic crisis. Immunoinformatics-based approaches to …

Design of a Multiepitope Pan‐Proteomic mRNA Vaccine Construct Against African Swine Fever Virus: A Reverse Vaccinology Approach

EMJS Sira, LE Fajardo, EC Banico… - Veterinary Medicine …, 2025 - Wiley Online Library
African swine fever (ASF), caused by African swine fever virus (ASFV), is a highly contagious
disease with devastating effects on the global pig industry. This warrants the development of …