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Current understanding and optimization strategies for efficient lignin-enzyme interaction: A review
From energy perspective, with abundant polysaccharides (45–85%), the renewable
lignocellulosic is recognized as the 2nd generation feedstock for bioethanol and bio-based …
lignocellulosic is recognized as the 2nd generation feedstock for bioethanol and bio-based …
The reaction mechanism of the Ideonella sakaiensis PETase enzyme
Polyethylene terephthalate (PET), the most abundantly produced polyester plastic, can be
depolymerized by the Ideonella sakaiensis PETase enzyme. Based on multiple PETase …
depolymerized by the Ideonella sakaiensis PETase enzyme. Based on multiple PETase …
Glycosyltransferase family 47 (GT47) proteins in plants and animals
Glycosyltransferases (GTs) are carbohydrate-active enzymes that are encoded by the
genomes of organisms spanning all domains of life. GTs catalyze glycosidic bond formation …
genomes of organisms spanning all domains of life. GTs catalyze glycosidic bond formation …
In vitro studies of the protein-interaction network of cell-wall lytic transglycosylase RlpA of Pseudomonas aeruginosa
The protein networks of cell-wall-biosynthesis assemblies are largely unknown. A key class
of enzymes in these assemblies is the lytic transglycosylases (LTs), of which eleven exist in …
of enzymes in these assemblies is the lytic transglycosylases (LTs), of which eleven exist in …
Genomic evidence for the widespread presence of GH45 cellulases among soil invertebrates
Lignocellulose is a major component of vascular plant biomass. Its decomposition is crucial
for the terrestrial carbon cycle. Microorganisms are considered primary decomposers, but …
for the terrestrial carbon cycle. Microorganisms are considered primary decomposers, but …
A trimeric glycosylated GH45 cellulase from the red abalone (Haliotis rufescens) exhibits endo and exoactivity
LJ Hernández-Benítez, MA Ramírez-Rodríguez… - Plos one, 2024 - journals.plos.org
The red abalone (Haliotis rufescens) represents North America's most important aquaculture
species. Its hepatopancreas is rich in cellulases and other polysaccharide-degrading …
species. Its hepatopancreas is rich in cellulases and other polysaccharide-degrading …
Reconstructing reactivity in dynamic host–guest systems at atomistic resolution: amide hydrolysis under confinement in the cavity of a coordination cage
Spatial confinement is widely employed by nature to attain unique efficiency in controlling
chemical reactions. Notable examples are enzymes, which selectively bind reactants and …
chemical reactions. Notable examples are enzymes, which selectively bind reactants and …
Revisiting theoretical tools and approaches for the valorization of recalcitrant lignocellulosic biomass to value-added chemicals
Biorefinery processes for converting lignocellulosic biomass to fuels and chemicals proceed
via an integrated series of steps. Biomass is first pretreated and deconstructed using …
via an integrated series of steps. Biomass is first pretreated and deconstructed using …
QM/MM simulations of enzymatic hydrolysis of cellulose: probing the viability of an endocyclic mechanism for an inverting cellulase
Glycoside hydrolases (GH) cleave carbohydrate glycosidic bonds and play pivotal roles in
living organisms and in many industrial processes. Unlike acid-catalyzed hydrolysis of …
living organisms and in many industrial processes. Unlike acid-catalyzed hydrolysis of …
Perspective: Path sampling methods applied to enzymatic catalysis
SD Schwartz - Journal of chemical theory and computation, 2022 - ACS Publications
This Perspective reviews the use of Transition Path Sampling methods to study
enzymatically catalyzed chemical reactions. First applied by our group to an enzymatic …
enzymatically catalyzed chemical reactions. First applied by our group to an enzymatic …