Impact of the Human Cell Atlas on medicine
Single-cell atlases promise to provide a 'missing link'between genes, diseases and
therapies. By identifying the specific cell types, states, programs and contexts where disease …
therapies. By identifying the specific cell types, states, programs and contexts where disease …
Identification, discrimination and heterogeneity of fibroblasts
Fibroblasts, the principal cell type of connective tissue, secrete extracellular matrix
components during tissue development, homeostasis, repair and disease. Despite this …
components during tissue development, homeostasis, repair and disease. Despite this …
Spatiotemporal analysis of human intestinal development at single-cell resolution
Development of the human intestine is not well understood. Here, we link single-cell RNA
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through …
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through …
Macrophage and neutrophil heterogeneity at single-cell spatial resolution in human inflammatory bowel disease
A Garrido-Trigo, AM Corraliza, M Veny, I Dotti… - Nature …, 2023 - nature.com
Ulcerative colitis and Crohn's disease are chronic inflammatory intestinal diseases with
perplexing heterogeneity in disease manifestation and response to treatment. While the …
perplexing heterogeneity in disease manifestation and response to treatment. While the …
Cells of the human intestinal tract mapped across space and time
The cellular landscape of the human intestinal tract is dynamic throughout life, develo** in
utero and changing in response to functional requirements and environmental exposures …
utero and changing in response to functional requirements and environmental exposures …
A roadmap for the human developmental cell atlas
Abstract The Human Developmental Cell Atlas (HDCA) initiative, which is part of the Human
Cell Atlas, aims to create a comprehensive reference map of cells during development. This …
Cell Atlas, aims to create a comprehensive reference map of cells during development. This …
[HTML][HTML] A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics
Background & Aims Single-cell transcriptomics offer unprecedented resolution of tissue
function at the cellular level, yet studies analyzing healthy adult human small intestine and …
function at the cellular level, yet studies analyzing healthy adult human small intestine and …
Charting human development using a multi-endodermal organ atlas and organoid models
Organs are composed of diverse cell types that traverse transient states during
organogenesis. To interrogate this diversity during human development, we generate a …
organogenesis. To interrogate this diversity during human development, we generate a …
Unsupervised removal of systematic background noise from droplet-based single-cell experiments using CellBender
Droplet-based single-cell assays, including single-cell RNA sequencing (scRNA-seq),
single-nucleus RNA sequencing (snRNA-seq) and cellular indexing of transcriptomes and …
single-nucleus RNA sequencing (snRNA-seq) and cellular indexing of transcriptomes and …
A spatial expression atlas of the adult human proximal small intestine
The mouse small intestine shows profound variability in gene expression along the crypt–
villus axis,. Whether similar spatial heterogeneity exists in the adult human gut remains …
villus axis,. Whether similar spatial heterogeneity exists in the adult human gut remains …