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Multi-omic data integration and analysis using systems genomics approaches: methods and applications in animal production, health and welfare
In the past years, there has been a remarkable development of high-throughput omics (HTO)
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
Recent advances in omic technologies for meat quality management
B Picard, B Lebret, I Cassar-Malek, L Liaubet, C Berri… - Meat Science, 2015 - Elsevier
The knowledge of the molecular organization of living organisms evolved considerably
during the last years. The methodologies associated also progressed with the development …
during the last years. The methodologies associated also progressed with the development …
Metabolomics and lipidomics profiles related to intramuscular fat content and flavor precursors between Laiwu and Yorkshire pigs
X Hou, R Zhang, M Yang, N Niu, J Wu, Z Shu, P Zhang… - Food Chemistry, 2023 - Elsevier
Chinese indigenous pig breeds have higher intramuscular fat content (IMF) and better meat
quality than Western commercial pigs. The differential metabolites and lipids in the skeletal …
quality than Western commercial pigs. The differential metabolites and lipids in the skeletal …
Serum and muscle metabolomics for the prediction of ultimate pH, a key factor for chicken-meat quality
S Beauclercq, L Nadal-Desbarats… - Journal of proteome …, 2016 - ACS Publications
Variations in muscle glycogen storage are highly correlated with variations in meat ultimate
pH (pHu), a key factor for poultry meat quality. A total of two chicken lines were divergently …
pH (pHu), a key factor for poultry meat quality. A total of two chicken lines were divergently …
Identification of a metabolomic signature associated with feed efficiency in beef cattle
Background Ruminants play a great role in sustainable livestock since they transform
pastures, silage, and crop residues into high-quality human food (ie milk and beef). Animals …
pastures, silage, and crop residues into high-quality human food (ie milk and beef). Animals …
Metabolomics and livestock genomics: Insights into a phenoty** frontier and its applications in animal breeding
L Fontanesi - Animal Frontiers, 2016 - academic.oup.com
Metabolomics is the emerging field of metabolome analysis that identify, quantify, and
characterize a large number of metabolites in biological samples (eg, milk, plasma, and …
characterize a large number of metabolites in biological samples (eg, milk, plasma, and …
Inhibition of enteric methanogenesis in dairy cows induces changes in plasma metabolome highlighting metabolic shifts and potential markers of emission
B Yanibada, U Hohenester, M Pétéra, C Canlet… - Scientific reports, 2020 - nature.com
There is scarce information on whether inhibition of rumen methanogenesis induces
metabolic changes on the host ruminant. Understanding these possible changes is …
metabolic changes on the host ruminant. Understanding these possible changes is …
Investigation of muscle transcriptomes using gradient boosting machine learning identifies molecular predictors of feed efficiency in growing pigs
F Messad, I Louveau, B Koffi, H Gilbert, F Gondret - BMC genomics, 2019 - Springer
Background Improving feed efficiency (FE) is a major challenge in pig production. This
complex trait is characterized by a high variability. Therefore, the identification of predictors …
complex trait is characterized by a high variability. Therefore, the identification of predictors …
Integrative analysis of metabolomic, proteomic and genomic data to reveal functional pathways and candidate genes for drip loss in pigs
The aim of this study was to integrate multi omics data to characterize underlying functional
pathways and candidate genes for drip loss in pigs. The consideration of different omics …
pathways and candidate genes for drip loss in pigs. The consideration of different omics …
Metabolomics evidences plasma and serum biomarkers differentiating two heavy pig breeds
In pigs, many production traits are known to vary among breeds or lines. These traits can be
considered end phenotypes or external traits as they are the final results of complex …
considered end phenotypes or external traits as they are the final results of complex …