Chloroplast genomes: diversity, evolution, and applications in genetic engineering

H Daniell, CS Lin, M Yu, WJ Chang - Genome biology, 2016 - Springer
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …

Genomics of crop wild relatives: expanding the gene pool for crop improvement

M Brozynska, A Furtado… - Plant biotechnology journal, 2016 - Wiley Online Library
Plant breeders require access to new genetic diversity to satisfy the demands of a growing
human population for more food that can be produced in a variable or changing climate and …

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

S Wicke, GM Schneeweiss, CW Depamphilis… - Plant molecular …, 2011 - Springer
This review bridges functional and evolutionary aspects of plastid chromosome architecture
in land plants and their putative ancestors. We provide an overview on the structure and …

Green giant—a tiny chloroplast genome with mighty power to produce high‐value proteins: history and phylogeny

H Daniell, S **, XG Zhu… - Plant biotechnology …, 2021 - Wiley Online Library
Free‐living cyanobacteria were entrapped by eukaryotic cells~ 2 billion years ago, ultimately
giving rise to chloroplasts. After a century of debate, the presence of chloroplast DNA was …

Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

H Huang, C Shi, Y Liu, SY Mao, LZ Gao - BMC Evolutionary biology, 2014 - Springer
Background Camellia is an economically and phylogenetically important genus in the family
Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and …

Plastid genomes of seed plants

RK Jansen, TA Ruhlman - Genomics of chloroplasts and mitochondria, 2012 - Springer
The field of comparative plastid genomics has burgeoned during the past decade, largely
due to the availability of rapid, less expensive genome sequencing technologies. Currently …

Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses

JB Yang, M Tang, HT Li, ZR Zhang, DZ Li - BMC evolutionary biology, 2013 - Springer
Background Cymbidium orchids, including some 50 species, are the famous flowers, and
they possess high commercial value in the floricultural industry. Furthermore, the values of …

Variation in mitogenome structural conformation in wild and cultivated lineages of sorghum corresponds with domestication history and plastome evolution

S Zhang, J Wang, W He, S Kan, X Liao, DR Jordan… - BMC Plant …, 2023 - Springer
Background Mitochondria are organelles within eukaryotic cells that are central to the
metabolic processes of cellular respiration and ATP production. However, the evolution of …

[HTML][HTML] A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions

JM Saarela, SV Burke, WP Wysocki, MD Barrett… - PeerJ, 2018 - peerj.com
The systematics of grasses has advanced through applications of plastome phylogenomics,
although studies have been largely limited to subfamilies or other subgroups of Poaceae …

The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses

Y Zhang, L Du, A Liu, J Chen, L Wu, W Hu… - Frontiers in plant …, 2016 - frontiersin.org
Epimedium L. is a phylogenetically and economically important genus in the family
Berberidaceae. We here sequenced the complete chloroplast (cp) genomes of four …