The regulation of bacterial transcription initiation

DF Browning, SJW Busby - Nature Reviews Microbiology, 2004 - nature.com
Bacteria use their genetic material with great effectiveness to make the right products in the
correct amounts at the appropriate time. Studying bacterial transcription initiation in …

Transcriptional regulation by the numbers: models

L Bintu, NE Buchler, HG Garcia, U Gerland… - Current opinion in …, 2005 - Elsevier
The expression of genes is regularly characterized with respect to how much, how fast,
when and where. Such quantitative data demands quantitative models. Thermodynamic …

Transcription activation by catabolite activator protein (CAP)

S Busby, RH Ebright - Journal of molecular biology, 1999 - Elsevier
Transcription activation by Escherichia coli catabolite activator protein (CAP) at each of two
classes of simple CAP-dependent promoters is understood in structural and mechanistic …

Design, construction and characterization of a set of insulated bacterial promoters

JH Davis, AJ Rubin, RT Sauer - Nucleic acids research, 2011 - academic.oup.com
We have generated a series of variable-strength, constitutive, bacterial promoters that act
predictably in different sequence contexts, span two orders of magnitude in strength and …

Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs

H Körner, HJ Sofia, WG Zumft - FEMS microbiology reviews, 2003 - academic.oup.com
Abstract The Crp-Fnr regulators, named after the first two identified members, are DNA-
binding proteins which predominantly function as positive transcription factors, though roles …

Feo–transport of ferrous iron into bacteria

ML Cartron, S Maddocks, P Gillingham, CJ Craven… - Biometals, 2006 - Springer
Bacteria commonly utilise a unique type of transporter, called Feo, to specifically acquire the
ferrous (Fe 2+) form of iron from their environment. Enterobacterial Feo systems are …

Activating transcription in bacteria

DJ Lee, SD Minchin, SJW Busby - Annual review of microbiology, 2012 - annualreviews.org
Bacteria use a variety of mechanisms to direct RNA polymerase to specific promoters in
order to activate transcription in response to growth signals or environmental cues …

Identification of the CRP regulon using in vitro and in vivo transcriptional profiling

D Zheng, C Constantinidou, JL Hobman… - Nucleic acids …, 2004 - academic.oup.com
The Escherichia coli cyclic AMP receptor protein (CRP) is a global regulator that controls
transcription initiation from more than 100 promoters by binding to a specific DNA sequence …

Transcriptional regulation by the numbers: applications

L Bintu, NE Buchler, HG Garcia, U Gerland… - Current opinion in …, 2005 - Elsevier
With the increasing amount of experimental data on gene expression and regulation, there
is a growing need for quantitative models to describe the data and relate them to their …

Mediation of Epstein-Barr Virus EBNA2 Transactivation by Recombination Signal-Binding Protein Jκ

T Henkel, PD Ling, SD Hayward, MG Peterson - Science, 1994 - science.org
The Epstein-Barr virus (EBV) transactivator protein, termed Epstein-Barr virus nuclear
antigen 2 (EBNA2), plays a critical role in the regulation of latent viral transcription and in the …