AttentionMGT-DTA: A multi-modal drug-target affinity prediction using graph transformer and attention mechanism
The accurate prediction of drug-target affinity (DTA) is a crucial step in drug discovery and
design. Traditional experiments are very expensive and time-consuming. Recently, deep …
design. Traditional experiments are very expensive and time-consuming. Recently, deep …
Graph pooling in graph neural networks: methods and their applications in omics studies
Y Wang, W Hou, N Sheng, Z Zhao, J Liu… - Artificial Intelligence …, 2024 - Springer
Graph neural networks (GNNs) process the graph-structured data using neural networks
and have proven successful in various graph processing tasks. Currently, graph pooling …
and have proven successful in various graph processing tasks. Currently, graph pooling …
Advances in Protein-Ligand Binding Affinity Prediction via Deep Learning: A Comprehensive Study of Datasets, Data Preprocessing Techniques, and Model …
GA Abdelkader, JD Kim - Current drug targets, 2024 - benthamdirect.com
Background Drug discovery is a complex and expensive procedure involving several timely
and costly phases through which new potential pharmaceutical compounds must pass to get …
and costly phases through which new potential pharmaceutical compounds must pass to get …
Modality-DTA: multimodality fusion strategy for drug–target affinity prediction
Prediction of the drug–target affinity (DTA) plays an important role in drug discovery. Existing
deep learning methods for DTA prediction typically leverage a single modality, namely …
deep learning methods for DTA prediction typically leverage a single modality, namely …
[HTML][HTML] AI's role in pharmaceuticals: assisting drug design from protein interactions to drug development
S Bechelli, J Delhommelle - Artificial Intelligence Chemistry, 2024 - Elsevier
Develo** new pharmaceutical compounds is a lengthy, costly, and intensive process. In
recent years, the development of Artificial Intelligence (AI), Machine Learning (ML), and …
recent years, the development of Artificial Intelligence (AI), Machine Learning (ML), and …
A comprehensive review of the recent advances on predicting drug-target affinity based on deep learning
X Zeng, SJ Li, SQ Lv, ML Wen, Y Li - Frontiers in Pharmacology, 2024 - frontiersin.org
Accurate calculation of drug-target affinity (DTA) is crucial for various applications in the
pharmaceutical industry, including drug screening, design, and repurposing. However …
pharmaceutical industry, including drug screening, design, and repurposing. However …
Exploring the potential of compound–protein complex structure-free models in virtual screening using BlendNet
Identifying new compounds that interact with a target is a crucial time-limiting step in the
initial phases of drug discovery. Compound–protein complex structure-based affinity …
initial phases of drug discovery. Compound–protein complex structure-based affinity …
TCRcost: a deep learning model utilizing TCR 3D structure for enhanced of TCR–peptide binding
Introduction Predicting TCR–peptide binding is a complex and significant computational
problem in systems immunology. During the past decade, a series of computational methods …
problem in systems immunology. During the past decade, a series of computational methods …
Advancing Bioactivity Prediction through Molecular Docking and Self-Attention
Bioactivity refers to the ability of a substance to induce biological effects within living
systems, often describing the influence of molecules, drugs, or chemicals on organisms. In …
systems, often describing the influence of molecules, drugs, or chemicals on organisms. In …
[HTML][HTML] A review of deep learning methods for ligand based drug virtual screening
Drug discovery is costly and time consuming, and modern drug discovery endeavors are
progressively reliant on computational methodologies, aiming to mitigate temporal and …
progressively reliant on computational methodologies, aiming to mitigate temporal and …