Revealing the vectors of cellular identity with single-cell genomics

A Wagner, A Regev, N Yosef - Nature biotechnology, 2016 - nature.com
Single-cell genomics has now made it possible to create a comprehensive atlas of human
cells. At the same time, it has reopened definitions of a cell's identity and of the ways in …

Single-cell RNA-seq: advances and future challenges

AE Saliba, AJ Westermann, SA Gorski… - Nucleic acids …, 2014 - academic.oup.com
Phenotypically identical cells can dramatically vary with respect to behavior during their
lifespan and this variation is reflected in their molecular composition such as the …

Diffusion maps for high-dimensional single-cell analysis of differentiation data

L Haghverdi, F Buettner, FJ Theis - Bioinformatics, 2015 - academic.oup.com
Motivation: Single-cell technologies have recently gained popularity in cellular differentiation
studies regarding their ability to resolve potential heterogeneities in cell populations …

Random access DNA memory using Boolean search in an archival file storage system

JL Banal, TR Shepherd, J Berleant, H Huang… - Nature materials, 2021 - nature.com
DNA is an ultrahigh-density storage medium that could meet exponentially growing
worldwide demand for archival data storage if DNA synthesis costs declined sufficiently and …

Single-cell analysis targeting the proteome

M Labib, SO Kelley - Nature Reviews Chemistry, 2020 - nature.com
The existence of cellular heterogeneity and its central relevance to biological phenomena
provides a strong rationale for a need for analytical methods that enable analysis at the …

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

SC Bendall, EF Simonds, P Qiu, ED Amir, PO Krutzik… - Science, 2011 - science.org
Flow cytometry is an essential tool for dissecting the functional complexity of hematopoiesis.
We used single-cell “mass cytometry” to examine healthy human bone marrow, measuring …

Nanomedicine

BYS Kim, JT Rutka, WCW Chan - New England Journal of …, 2010 - Mass Medical Soc
Nanomedicine | New England Journal of Medicine Skip to main content The New England
Journal of Medicine homepage Advanced Search SEARCH SPECIALTIES Cardiology …

Quantum dots in bioanalysis: a review of applications across various platforms for fluorescence spectroscopy and imaging

E Petryayeva, WR Algar, IL Medintz - Applied spectroscopy, 2013 - journals.sagepub.com
Semiconductor quantum dots (QDs) are brightly luminescent nanoparticles that have found
numerous applications in bioanalysis and bioimaging. In this review, we highlight recent …

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

P Qiu, EF Simonds, SC Bendall, KD Gibbs Jr… - Nature …, 2011 - nature.com
The ability to analyze multiple single-cell parameters is critical for understanding cellular
heterogeneity. Despite recent advances in measurement technology, methods for analyzing …

Paths to stemness: building the ultimate antitumour T cell

L Gattinoni, CA Klebanoff, NP Restifo - Nature Reviews Cancer, 2012 - nature.com
Stem cells are defined by the ability to self-renew and to generate differentiated progeny,
qualities that are maintained by evolutionarily conserved pathways that can lead to cancer …