Ultrafast chemistry: Using time-resolved vibrational spectroscopy for interrogation of structural dynamics

ETJ Nibbering, H Fidder, E Pines - Annu. Rev. Phys. Chem., 2005 - annualreviews.org
▪ Abstract Time-resolved infrared (IR) and Raman spectroscopy elucidates molecular
structure evolution during ultrafast chemical reactions. Following vibrational marker modes …

Algal sensory photoreceptors

P Hegemann - Annu. Rev. Plant Biol., 2008 - annualreviews.org
Only five major types of sensory photoreceptors (BLUF-proteins, cryptochromes,
phototropins, phytochromes, and rhodopsins) are used in nature to regulate developmental …

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein

K Pande, CDM Hutchison, G Groenhof, A Aquila… - Science, 2016 - science.org
A variety of organisms have evolved mechanisms to detect and respond to light, in which the
response is mediated by protein structural changes after photon absorption. The initial step …

Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography

F Schotte, HS Cho, VRI Kaila, H Kamikubo… - Proceedings of the …, 2012 - pnas.org
To understand how signaling proteins function, it is crucial to know the time-ordered
sequence of events that lead to the signaling state. We recently developed on the BioCARS …

Volume-conserving transcis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography

YO Jung, JH Lee, J Kim, M Schmidt, K Moffat… - Nature …, 2013 - nature.com
Trans-to-cis isomerization, the key reaction in photoactive proteins, usually cannot occur
through the standard one-bond-flip mechanism. Owing to spatial constraints imposed by a …

Making light work of enzyme catalysis: protochlorophyllide oxidoreductase

DJ Heyes, CN Hunter - Trends in biochemical sciences, 2005 - cell.com
In the chlorophyll biosynthetic pathway, the enzyme protochlorophyllide oxidoreductase
(POR) catalyses a key light-driven reaction that triggers a profound transformation in plant …

Probing the early stages of photoreception in photoactive yellow protein with ultrafast time-domain Raman spectroscopy

H Kuramochi, S Takeuchi, K Yonezawa, H Kamikubo… - Nature Chemistry, 2017 - nature.com
Unveiling the nuclear motions of photoreceptor proteins in action is a crucial goal in protein
science in order to understand their elaborate mechanisms and how they achieve optimal …

Photoreceptors take charge: emerging principles for light sensing

T Kottke, A **e, DS Larsen… - Annual review of …, 2018 - annualreviews.org
The first stage in biological signaling is based on changes in the functional state of a
receptor protein triggered by interaction of the receptor with its ligand (s). The light-triggered …

[HTML][HTML] Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy

DS Larsen, IHM van Stokkum, M Vengris… - Biophysical journal, 2004 - cell.com
Photoactive yellow protein is the protein responsible for initiating the" blue-light vision" of
Halorhodospira halophila. The dynamical processes responsible for triggering the …

Spectroscopic Properties of the Carotenoid 3'-Hydroxyechinenone in the Orange Carotenoid Protein from the Cyanobacterium Arthrospira maxima

T Polívka, CA Kerfeld, T Pascher, V Sundström - Biochemistry, 2005 - ACS Publications
The cyanobacterial water-soluble orange carotenoid binding protein (OCP) is an ideal
system for study of the effects of protein environment on photophysical properties of …