Interpretability research of deep learning: A literature survey

B Xua, G Yang - Information Fusion, 2024 - Elsevier
Deep learning (DL) has been widely used in various fields. However, its black-box nature
limits people's understanding and trust in its decision-making process. Therefore, it becomes …

Transformer models in biomedicine

S Madan, M Lentzen, J Brandt, D Rueckert… - BMC Medical Informatics …, 2024 - Springer
Deep neural networks (DNN) have fundamentally revolutionized the artificial intelligence
(AI) field. The transformer model is a type of DNN that was originally used for the natural …

Double-branch multi-attention based graph neural network for knowledge graph completion

H Xu, J Bao, W Liu - Proceedings of the 61st Annual Meeting of the …, 2023 - aclanthology.org
Graph neural networks (GNNs), which effectively use topological structures in the
knowledge graphs (KG) to embed entities and relations in low-dimensional spaces, have …

Edgeformers: Graph-empowered transformers for representation learning on textual-edge networks

B **, Y Zhang, Y Meng, J Han - arxiv preprint arxiv:2302.11050, 2023 - arxiv.org
Edges in many real-world social/information networks are associated with rich text
information (eg, user-user communications or user-product reviews). However, mainstream …

KGETCDA: an efficient representation learning framework based on knowledge graph encoder from transformer for predicting circRNA-disease associations

J Wu, Z Ning, Y Ding, Y Wang, Q Peng… - Briefings in …, 2023 - academic.oup.com
Recent studies have demonstrated the significant role that circRNA plays in the progression
of human diseases. Identifying circRNA-disease associations (CDA) in an efficient manner …

Graph Structure Enhanced Pre-Training Language Model for Knowledge Graph Completion

H Zhu, D Xu, Y Huang, Z **, W Ding… - … on Emerging Topics …, 2024 - ieeexplore.ieee.org
A vast amount of textual and structural information is required for knowledge graph
construction and its downstream tasks. However, most of the current knowledge graphs are …

Knowledge Bases in Support of Large Language Models for Processing Web News

Y Zhang, N Pakka, NF Tzeng - arxiv preprint arxiv:2411.08278, 2024 - arxiv.org
Large Language Models (LLMs) have received considerable interest in wide applications
lately. During pre-training via massive datasets, such a model implicitly memorizes the …

Training a Tucker Model With Shared Factors: a Riemannian Optimization Approach

I Peshekhonov, A Arzhantsev… - … Conference on Artificial …, 2024 - proceedings.mlr.press
Factorization of a matrix into a product of two rectangular factors, is a classic tool in various
machine learning applications. Tensor factorizations generalize this concept to more than …

Fully-inductive link prediction with path-based graph neural network: A comparative analysis

X Liang, G Si, J Li, Z An, P Tian, F Zhou - Neurocomputing, 2024 - Elsevier
Recently, fully-inductive link prediction in knowledge graphs (KGs) has aimed to predict
missing links between unseen–unseen entities, independently completing evolving KGs …

Advancing rule learning in knowledge graphs with structure-aware graph transformer

K Xu, M Chen, Y Feng, Z Dong - Information Processing & Management, 2025 - Elsevier
In knowledge graphs (KGs), logic rules offer interpretable explanations for predictions and
are essential for reasoning on downstream tasks, such as question answering. However, a …