Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review
P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …
methods and in rational drug design, the increase in approved drugs in the past decade did …
Network analyses in systems pharmacology
SI Berger, R Iyengar - Bioinformatics, 2009 - academic.oup.com
Abstract Systems pharmacology is an emerging area of pharmacology which utilizes
network analysis of drug action as one of its approaches. By considering drug actions and …
network analysis of drug action as one of its approaches. By considering drug actions and …
Molecular networks for the study of TCM pharmacology
J Zhao, P Jiang, W Zhang - Briefings in Bioinformatics, 2010 - academic.oup.com
To target complex, multi-factorial diseases more effectively, there has been an emerging
trend of multi-target drug development based on network biology, as well as an increasing …
trend of multi-target drug development based on network biology, as well as an increasing …
[LIBRO][B] Biomolecular networks: methods and applications in systems biology
Alternative techniques and tools for analyzing biomolecular networks With the recent rapid
advances in molecular biology, high-throughput experimental methods have resulted in …
advances in molecular biology, high-throughput experimental methods have resulted in …
[LIBRO][B] Algorithms for analysis, inference, and control of Boolean networks
T Akutsu - 2018 - World Scientific
The Boolean network (BN) is a mathematical model of genetic networks and is based on
Boolean functions. Boolean functions are functions on the Boolean domain that consists of …
Boolean functions. Boolean functions are functions on the Boolean domain that consists of …
Predicting enzyme targets for cancer drugs by profiling human metabolic reactions in NCI-60 cell lines
Background Drugs can influence the whole metabolic system by targeting enzymes which
catalyze metabolic reactions. The existence of interactions between drugs and metabolic …
catalyze metabolic reactions. The existence of interactions between drugs and metabolic …
Network-based strategies can help mono-and poly-pharmacology drug discovery: a systems biology view
The cellular network and its environment govern cell and organism behavior and are
fundamental to the comprehension of function, misfunction and drug discovery. Over the last …
fundamental to the comprehension of function, misfunction and drug discovery. Over the last …
Network output controllability-based method for drug target identification
Biomolecules do not perform their functions alone, but interactively with one another to form
so called biomolecular networks. It is well known that a complex disease stems from the …
so called biomolecular networks. It is well known that a complex disease stems from the …
Constrained target controllability of complex networks
WF Guo, SW Zhang, ZG Wei, T Zeng… - Journal of Statistical …, 2017 - iopscience.iop.org
It is of great theoretical interest and practical significance to study how to control a system by
applying perturbations to only a few driver nodes. Recently, a hot topic of modern network …
applying perturbations to only a few driver nodes. Recently, a hot topic of modern network …
Two-stage flux balance analysis of metabolic networks for drug target identification
Background Efficient identification of drug targets is one of major challenges for drug
discovery and drug development. Traditional approaches to drug target identification include …
discovery and drug development. Traditional approaches to drug target identification include …