The role and activity of SWI/SNF chromatin remodelers

T Bieluszewski, S Prakash, T Roulé… - Annual Review of Plant …, 2023 - annualreviews.org
SWITCH deficient SUCROSE NONFERMENTING (SWI/SNF) class chromatin remodeling
complexes (CRCs) use the energy derived from ATP hydrolysis to facilitate access of …

Long non-coding RNAs and their functions in plants

JA Chekanova - Current opinion in plant biology, 2015 - Elsevier
Highlights•Plant lncRNAs participate in regulation of transcription, splicing, and nuclear
structure.•In flowering, multiple lncRNAs act in silencing of FLC via diverse …

[HTML][HTML] Noncoding transcription by alternative RNA polymerases dynamically regulates an auxin-driven chromatin loop

F Ariel, T Jegu, D Latrasse, N Romero-Barrios, A Christ… - Molecular cell, 2014 - cell.com
The eukaryotic epigenome is shaped by the genome topology in three-dimensional space.
Dynamic reversible variations in this epigenome structure directly influence the …

Wheat chromatin architecture is organized in genome territories and transcription factories

L Concia, A Veluchamy, JS Ramirez-Prado… - Genome Biology, 2020 - Springer
Background Polyploidy is ubiquitous in eukaryotic plant and fungal lineages, and it leads to
the co-existence of several copies of similar or related genomes in one nucleus. In plants …

Genome-wide analysis of chromatin packing in Arabidopsis thaliana at single-gene resolution

C Liu, C Wang, G Wang, C Becker, M Zaidem… - Genome …, 2016 - genome.cshlp.org
The three-dimensional packing of the genome plays an important role in regulating gene
expression. We have used Hi-C, a genome-wide chromatin conformation capture (3C) …

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata

D Armaleo, O Müller, F Lutzoni, ÓS Andrésson, G Blanc… - BMC genomics, 2019 - Springer
Abstract Background Lichens, encompassing 20,000 known species, are symbioses
between specialized fungi (mycobionts), mostly ascomycetes, and unicellular green algae or …

Battles and hijacks: noncoding transcription in plants

F Ariel, N Romero-Barrios, T Jégu, M Benhamed… - Trends in plant …, 2015 - cell.com
Noncoding RNAs have emerged as major components of the eukaryotic transcriptome.
Genome-wide analyses revealed the existence of thousands of long noncoding RNAs …

Beyond the Genetic Pathways, Flowering Regulation Complexity in Arabidopsis thaliana

S Quiroz, JC Yustis, EC Chávez-Hernández… - International Journal of …, 2021 - mdpi.com
Flowering is one of the most critical developmental transitions in plants' life. The irreversible
change from the vegetative to the reproductive stage is strictly controlled to ensure the …

Long noncoding RNAs in plants

HLV Wang, JA Chekanova - Long non coding RNA biology, 2017 - Springer
The eukaryotic genomes are pervasively transcribed. In addition to protein-coding RNAs,
thousands of long noncoding RNAs (lncRNAs) modulate key molecular and biological …

Chromatin‐remodeling complexes: Conserved and plant‐specific subunits in Arabidopsis

JY Shang, XJ He - Journal of integrative plant biology, 2022 - Wiley Online Library
Adenosine triphosphate‐dependent chromatin remodeling complexes are important for the
regulation of transcription, DNA replication, and genome stability in eukaryotes. Although …