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Light-driven and phonon-assisted dynamics in organic and semiconductor nanostructures
Rapid advances in chemical synthesis and fabrication techniques have led to a boost in
manufacturing and design of novel nanostructured materials that exhibit unique and often …
manufacturing and design of novel nanostructured materials that exhibit unique and often …
[HTML][HTML] The good, the bad and the user in soft matter simulations
Molecular dynamics (MD) simulations have become popular in materials science,
biochemistry, biophysics and several other fields. Improvements in computational resources …
biochemistry, biophysics and several other fields. Improvements in computational resources …
Structural basis for directional chitin biosynthesis
W Chen, P Cao, Y Liu, A Yu, D Wang, L Chen… - Nature, 2022 - nature.com
Chitin, the most abundant aminopolysaccharide in nature, is an extracellular polymer
consisting of N-acetylglucosamine (GlcNAc) units. The key reactions of chitin biosynthesis …
consisting of N-acetylglucosamine (GlcNAc) units. The key reactions of chitin biosynthesis …
Hydrophobicity of arginine leads to reentrant liquid-liquid phase separation behaviors of arginine-rich proteins
Intrinsically disordered proteins rich in cationic amino acid groups can undergo Liquid-
Liquid Phase Separation (LLPS) in the presence of charge-balancing anionic counterparts …
Liquid Phase Separation (LLPS) in the presence of charge-balancing anionic counterparts …
Pressure control using stochastic cell rescaling
Molecular dynamics simulations require barostats to be performed at a constant pressure.
The usual recipe is to employ the Berendsen barostat first, which displays a first-order …
The usual recipe is to employ the Berendsen barostat first, which displays a first-order …
Tinker 8: software tools for molecular design
The Tinker software, currently released as version 8, is a modular molecular mechanics and
dynamics package written primarily in a standard, easily portable dialect of Fortran 95 with …
dynamics package written primarily in a standard, easily portable dialect of Fortran 95 with …
i-PI 2.0: A universal force engine for advanced molecular simulations
Progress in the atomic-scale modeling of matter over the past decade has been tremendous.
This progress has been brought about by improvements in methods for evaluating …
This progress has been brought about by improvements in methods for evaluating …
Non-encapsulation approach for high-performance Li–S batteries through controlled nucleation and growth
High-surface-area, nanostructured carbon is widely used for encapsulating sulfur and
improving the cyclic stability of Li–S batteries, but the high carbon content and low packing …
improving the cyclic stability of Li–S batteries, but the high carbon content and low packing …
Structural basis of outer membrane protein insertion by the BAM complex
All Gram-negative bacteria, mitochondria and chloroplasts have outer membrane proteins
(OMPs) that perform many fundamental biological processes. The OMPs in Gram-negative …
(OMPs) that perform many fundamental biological processes. The OMPs in Gram-negative …
The coupling between stability and ion pair formation in magnesium electrolytes from first-principles quantum mechanics and classical molecular dynamics
In this work we uncover a novel effect between concentration dependent ion pair formation
and anion stability at reducing potentials, eg, at the metal anode. Through comprehensive …
and anion stability at reducing potentials, eg, at the metal anode. Through comprehensive …