Viral variant-resolved wastewater surveillance of SARS-CoV-2 at national scale

F Amman, R Markt, L Endler, S Hupfauf, B Agerer… - Nature …, 2022 - nature.com
SARS-CoV-2 surveillance by wastewater-based epidemiology is poised to provide a
complementary approach to sequencing individual cases. However, robust quantification of …

Wastewater Sequencing—An Innovative Method for Variant Monitoring of SARS-CoV-2 in Populations

M Tamáš, A Potocarova, B Konecna, Ľ Klucar… - International Journal of …, 2022 - mdpi.com
The SARS-CoV-2 outbreak has already affected more than 555 million people, and 6.3
million people have died. Due to its high infectivity, it is crucial to track SARS-CoV-2 …

SARS-CoV-2 whole-genome sequencing using Oxford nanopore technology for variant monitoring in wastewaters

L Barbé, J Schaeffer, A Besnard, S Jousse… - Frontiers in …, 2022 - frontiersin.org
Since the beginning of the Coronavirus Disease-19 (COVID-19) pandemic, multiple Severe
Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) mutations have been reported …

Wastewater surveillance uncovers regional diversity and dynamics of SARS-CoV-2 variants across nine states in the USA

RS Fontenele, Y Yang, EM Driver, A Magge… - Science of the Total …, 2023 - Elsevier
Wastewater-based epidemiology (WBE) is a non-invasive and cost-effective approach for
monitoring the spread of a pathogen within a community. WBE has been adopted as one of …

SARS-CoV-2 RNA abundance in wastewater as a function of distinct urban sewershed size

RH Holm, A Mukherjee, JP Rai, RA Yeager… - … : Water Research & …, 2022 - pubs.rsc.org
During the COVID-19 pandemic, wastewater-based epidemiology has emerged as a
promising approach for monitoring SARS-CoV-2 prevalence on a community-level. Despite …

SARS-CoV-2 wastewater genomic surveillance: approaches, challenges, and opportunities

V Munteanu, M Saldana, D Ciorba, V Bostan… - arxiv preprint arxiv …, 2023 - arxiv.org
During the SARS-CoV-2 pandemic, wastewater-based genomic surveillance (WWGS)
emerged as an efficient viral surveillance tool that takes into account asymptomatic cases …

The detection of periodic reemergence events of SARS-CoV-2 Delta strain in communities dominated by Omicron

CE Westcott, KJ Sokoloski, EC Rouchka, JH Chariker… - Pathogens, 2022 - mdpi.com
Despite entering an endemic phase, SARS-CoV-2 remains a significant burden to public
health across the global community. Wastewater sampling has consistently proven utility to …

Definition of a concentration and RNA extraction protocol for optimal whole genome sequencing of SARS-CoV-2 in wastewater (ANRS0160)

A Chaqroun, G El Soufi, Z Gerber, J Loutreul… - Science of the Total …, 2024 - Elsevier
Monitoring the presence of RNA from emerging pathogenic viruses, such as SARS-CoV-2,
in wastewater (WW) samples requires suitable methods to ensure an effective response …

[HTML][HTML] Quantifying the relationship between sub-population wastewater samples and community-wide SARS-CoV-2 seroprevalence

T Smith, RH Holm, RJ Keith, AR Amraotkar… - Science of the Total …, 2022 - Elsevier
Robust epidemiological models relating wastewater to community disease prevalence are
lacking. Assessments of SARS-CoV-2 infection rates have relied primarily on convenience …

Sequencing of SARS-CoV-2 RNA fragments in wastewater detects the spread of new variants during major events

D Zhakparov, Y Quirin, Y **ao, N Battaglia, M Holzer… - Microorganisms, 2023 - mdpi.com
The sequencing of SARS-CoV-2 RNA in wastewater is an unbiased method to detect the
spread of emerging variants and to track regional infection dynamics, which is especially …