The molecular phylogeny of land plants: progress and future prospects

GQ Liu, L Lian, W Wang - Diversity, 2022 - mdpi.com
Phylogenetics has become a powerful tool in many areas of biology. Land plants are the
most important primary producers of terrestrial ecosystems and have colonized various …

The phylogenetic relationships of neosuchian crocodiles and their implications for the convergent evolution of the longirostrine condition

SS Groh, P Upchurch, PM Barrett… - Zoological Journal of the …, 2020 - academic.oup.com
Since their origin in the Late Triassic, crocodylomorphs have had a long history of
evolutionary change. Numerous studies examined their phylogeny, but none have …

Constraining uncertainty in the timescale of angiosperm evolution and the veracity of a Cretaceous Terrestrial Revolution

J Barba‐Montoya, M Dos Reis, H Schneider… - New …, 2018 - Wiley Online Library
Through the lens of the fossil record, angiosperm diversification precipitated a Cretaceous
Terrestrial Revolution (KTR) in which pollinators, herbivores and predators underwent …

The phylogeny of early amniotes and the affinities of Parareptilia and Varanopidae

DP Ford, RBJ Benson - Nature Ecology & Evolution, 2020 - nature.com
Amniotes include mammals, reptiles and birds, representing 75% of extant vertebrate
species on land. They originated around 318 million years ago in the early Late …

[HTML][HTML] Craniodental morphology and phylogeny of marsupials

RMD Beck, RS Voss, SA Jansa - Bulletin of the American Museum of …, 2022 - BioOne
The current literature on marsupial phylogenetics includes numerous studies based on
analyses of morphological data with limited sampling of Recent and fossil taxa, and many …

Hagfish from the Cretaceous Tethys Sea and a reconciliation of the morphological–molecular conflict in early vertebrate phylogeny

T Miyashita, MI Coates, R Farrar… - Proceedings of the …, 2019 - National Acad Sciences
Hagfish depart so much from other fishes anatomically that they were sometimes considered
not fully vertebrate. They may represent:(i) an anatomically primitive outgroup of vertebrates …

Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets

MR Smith - Biology letters, 2019 - royalsocietypublishing.org
Phylogenetic analysis aims to establish the true relationships between taxa. Different
analytical methods, however, can reach different conclusions. In order to establish which …

Sphenodontian phylogeny and the impact of model choice in Bayesian morphological clock estimates of divergence times and evolutionary rates

TR Simões, MW Caldwell, SE Pierce - BMC biology, 2020 - Springer
Background The vast majority of all life that ever existed on earth is now extinct and several
aspects of their evolutionary history can only be assessed by using morphological data from …

Phylogenetic analysis of Middle-Late Miocene apes

KD Pugh - Journal of Human Evolution, 2022 - Elsevier
Despite intensive study, many aspects of the evolutionary history of great apes and humans
(Hominidae) are not well understood. In particular, the phylogenetic relationships of many …

Handling logical character dependency in phylogenetic inference: extensive performance testing of assumptions and solutions using simulated and empirical data

TR Simões, OV Vernygora, BAS de Medeiros… - Systematic …, 2023 - academic.oup.com
Logical character dependency is a major conceptual and methodological problem in
phylogenetic inference of morphological data sets, as it violates the assumption of character …