Conjugative plasmids: vessels of the communal gene pool

A Norman, LH Hansen… - … Transactions of the …, 2009 - royalsocietypublishing.org
Comparative whole-genome analyses have demonstrated that horizontal gene transfer
(HGT) provides a significant contribution to prokaryotic genome innovation. The evolution of …

Plasmids foster diversification and adaptation of bacterial populations in soil

H Heuer, K Smalla - FEMS microbiology reviews, 2012 - academic.oup.com
It is increasingly being recognized that the transfer of conjugative plasmids across species
boundaries plays a vital role in the adaptability of bacterial populations in soil. There are …

Predicting plasmid promiscuity based on genomic signature

H Suzuki, H Yano, CJ Brown, EM Top - Journal of bacteriology, 2010 - Am Soc Microbiol
Despite the important contribution of self-transmissible plasmids to bacterial evolution, little
is understood about the range of hosts in which these plasmids have evolved. Our goal was …

Towards a taxonomy of conjugative plasmids

R Fernandez-Lopez, S Redondo… - Current opinion in …, 2017 - Elsevier
Highlights•Conjugative plasmids are key mediators of Horizontal Gene Transfer in Bacteria,
frequently mediating environmental adaptation.•In order to make sense of the increasingly …

Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year

S Dealtry, PN Holmsgaard, V Dunon… - Applied and …, 2014 - Am Soc Microbiol
Biopurification systems (BPS) are used on farms to control pollution by treating pesticide-
contaminated water. It is assumed that mobile genetic elements (MGEs) carrying genes …

The behavior and significance of degradative plasmids belonging to Inc groups in Pseudomonas within natural environments and microcosms

M Shintani, Y Takahashi, H Yamane… - Microbes and …, 2010 - jstage.jst.go.jp
Over the past few decades, degradative plasmids have been isolated from bacteria capable
of degrading a variety of both natural and man-made compounds. Degradative plasmids …

Identification of novel toluene monooxygenase genes in a hydrocarbon-polluted sediment using sequence-and function-based screening of metagenomic libraries

E Bouhajja, M McGuire, MR Liles, G Bataille… - Applied microbiology …, 2017 - Springer
The microbial potential for toluene degradation within sediments from a tar oil-contaminated
site in Flingern, Germany, was assessed using a metagenomic approach. High molecular …

Insights into the genomic plasticity of Pseudomonas putida KF715, a strain with unique biphenyl‐utilizing activity and genome instability properties

H Suenaga, H Fujihara, N Kimura… - Environmental …, 2017 - Wiley Online Library
Pseudomonas putida KF715 exhibits unique properties in both catabolic activity and
genome plasticity. Our previous studies revealed that the DNA region containing biphenyl …

Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats

S Dealtry, GC Ding, V Weichelt, V Dunon, A Schlüter… - PLoS …, 2014 - journals.plos.org
IncP-1, IncP-7 and IncP-9 plasmids often carry genes encoding enzymes involved in the
degradation of man-made and natural contaminants, thus contributing to bacterial survival in …

Metal oxides, clay minerals and charcoal determine the composition of microbial communities in matured artificial soils and their response to phenanthrene

D Babin, GC Ding, GJ Pronk, K Heister… - FEMS microbiology …, 2013 - academic.oup.com
Microbial communities in soil reside in a highly heterogeneous habitat where diverse
mineral surfaces, complex organic matter and microorganisms interact with each other. This …