Active turbulence

R Alert, J Casademunt, JF Joanny - Annual Review of …, 2022 - annualreviews.org
Active fluids exhibit spontaneous flows with complex spatiotemporal structure, which have
been observed in bacterial suspensions, sperm cells, cytoskeletal suspensions, self …

Dedalus: A flexible framework for numerical simulations with spectral methods

KJ Burns, GM Vasil, JS Oishi, D Lecoanet… - Physical Review …, 2020 - APS
Numerical solutions of partial differential equations enable a broad range of scientific
research. The Dedalus project is a flexible, open-source, parallelized computational …

Modelling fluid deformable surfaces with an emphasis on biological interfaces

A Torres-Sánchez, D Millán, M Arroyo - Journal of fluid mechanics, 2019 - cambridge.org
Fluid deformable surfaces are ubiquitous in cell and tissue biology, including lipid bilayers,
the actomyosin cortex or epithelial cell sheets. These interfaces exhibit a complex interplay …

Phase transition to large scale coherent structures in two-dimensional active matter turbulence

M Linkmann, G Boffetta, MC Marchetti, B Eckhardt - Physical review letters, 2019 - APS
The collective motion of microswimmers in suspensions induce patterns of vortices on
scales that are much larger than the characteristic size of a microswimmer, attaining a state …

Geometrical control of active turbulence in curved topographies

DJG Pearce, PW Ellis, A Fernandez-Nieves, L Giomi - Physical review letters, 2019 - APS
We investigate the turbulent dynamics of a two-dimensional active nematic liquid crystal
constrained to a curved surface. Using a combination of hydrodynamic and particle-based …

A numerical approach for fluid deformable surfaces with conserved enclosed volume

V Krause, A Voigt - Journal of Computational Physics, 2023 - Elsevier
We consider surface finite elements and a semi-implicit time step** scheme to simulate
fluid deformable surfaces. Such surfaces are modeled by incompressible surface Navier …

A finite element approach for vector-and tensor-valued surface PDEs

M Nestler, I Nitschke, A Voigt - Journal of Computational Physics, 2019 - Elsevier
We derive a Cartesian componentwise description of the covariant derivative of tangential
tensor fields of any degree on Riemannian manifolds. This allows to reformulate any vector …

Hydrodynamic interactions in polar liquid crystals on evolving surfaces

I Nitschke, S Reuther, A Voigt - Physical Review Fluids, 2019 - APS
We consider the derivation and numerical solution of the flow of passive and active polar
liquid crystals, whose molecular orientation is subjected to a tangential anchoring on an …

Tensor calculus in spherical coordinates using Jacobi polynomials. Part-I: mathematical analysis and derivations

GM Vasil, D Lecoanet, KJ Burns, JS Oishi… - Journal of Computational …, 2019 - Elsevier
This paper presents a method for accurate and efficient computations on scalar, vector and
tensor fields in three-dimensional spherical polar coordinates. The method uses spin …

Active nematodynamics on curved surfaces--the influence of geometric forces on motion patterns of topological defects

M Nestler, A Voigt - arxiv preprint arxiv:2107.07779, 2021 - arxiv.org
We derive and numerically solve a surface active nematodynamics model. We validate the
numerical approach on a sphere and analyse the influence of hydrodynamics on the …