The rice transcription factor IDEF1 is essential for the early response to iron deficiency, and induces vegetative expression of late embryogenesis abundant genes

T Kobayashi, RN Itai, Y Ogo, Y Kakei… - The Plant …, 2009 - Wiley Online Library
Higher plants maintain iron homeostasis by regulating the expression of iron (Fe)‐related
genes in accordance with Fe availability. The transcription factor IDEF1 regulates the …

Gibberellic acid and cGMP-dependent transcriptional regulation in Arabidopsis thaliana

R Bastian, A Dawe, S Meier, N Ludidi… - Plant signaling & …, 2010 - Taylor & Francis
An ever increasing amount of transcriptomic data and analysis tools provide novel insight
into complex responses of biological systems. Given these resources we have undertaken to …

Supra‐optimal expression of the cold‐regulated OsMyb4 transcription factor in transgenic rice changes the complexity of transcriptional network with major effects on …

MR PARK, KILY YUN, B Mohanty… - Plant, cell & …, 2010 - Wiley Online Library
Abstract The R2R3‐type OsMyb4 transcription factor of rice has been shown to play a role in
the regulation of osmotic adjustment in heterologous overexpression studies. However, the …

Genome-wide survey and comprehensive expression profiling of Aux/IAA gene family in chickpea and soybean

VK Singh, M Jain - Frontiers in Plant Science, 2015 - frontiersin.org
Auxin plays a central role in many aspects of plant growth and development. Auxin/Indole-3-
Acetic Acid (Aux/IAA) genes cooperate with several other components in the perception and …

Transcriptional regulatory network analysis of MYB transcription factor family genes in rice

S Smita, A Katiyar, V Chinnusamy… - Frontiers in plant …, 2015 - frontiersin.org
MYB transcription factor (TF) is one of the largest TF families and regulates defense
responses to various stresses, hormone signaling as well as many metabolic and …

Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes

A Singh, U Singh, D Mittal, A Grover - BMC genomics, 2010 - Springer
Background ClpB-cyt/HSP100 protein acts as chaperone, mediating disaggregation of
denatured proteins. Previous studies have shown that ClpB-cyt/HSP100 gene belongs to the …

Upstream regulatory architecture of rice genes: summarizing the baseline towards genus-wide comparative analysis of regulatory networks and allele mining

BG de Los Reyes, B Mohanty, SJ Yun, MR Park… - Rice, 2015 - Springer
Dissecting the upstream regulatory architecture of rice genes and their cognate regulator
proteins is at the core of network biology and its applications to comparative functional …

Overexpression of Medicago sativa LEA4-4 can improve the salt, drought, and oxidation resistance of transgenic Arabidopsis

H Jia, X Wang, Y Shi, X Wu, Y Wang, J Liu, Z Fang… - PLoS …, 2020 - journals.plos.org
Late embryogenesis abundant (LEA) proteins are widely involved in many adverse
conditions among plants. In this study, we isolated a LEA 4 gene from alfalfa (Medicago …

Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice

B Mohanty, V Herath, E Wijaya, HC Yeo… - Gene, 2012 - Elsevier
Unlike other cereal species, rice is able to germinate and elongate under anoxia. The
regulatory mechanism that configures the transcriptome of rice during anaerobic …

OsLEA1a, a new Em-like protein of cereal plants

MD Shih, LT Huang, FJ Wei, MT Wu… - Plant and cell …, 2010 - academic.oup.com
Proteins abundant in seeds during the late stages of development, late embryogenesis
abundant (LEA) proteins, are associated with desiccation tolerance. More than 100 of the …