CRISPR/Cas systems in genome editing: methodologies and tools for sgRNA design, off‐target evaluation, and strategies to mitigate off‐target effects

H Manghwar, B Li, X Ding, A Hussain… - Advanced …, 2020 - Wiley Online Library
Life sciences have been revolutionized by genome editing (GE) tools, including zinc finger
nucleases, transcription activator‐Like effector nucleases, and CRISPR (clustered regulatory …

[HTML][HTML] Construct design for CRISPR/Cas-based genome editing in plants

MM Hassan, Y Zhang, G Yuan, K De, JG Chen… - Trends in Plant …, 2021 - cell.com
CRISPR construct design is a key step in the practice of genome editing, which includes
identification of appropriate Cas proteins, design and selection of guide RNAs (gRNAs), and …

[HTML][HTML] A review of emerging physical transfection methods for CRISPR/Cas9-mediated gene editing

AK Fajrial, QQ He, NI Wirusanti, JE Slansky, X Ding - Theranostics, 2020 - ncbi.nlm.nih.gov
Gene editing is a versatile technique in biomedicine that promotes fundamental research as
well as clinical therapy. The development of Clustered Regularly Interspaced Short …

A compact Cas9 ortholog from Staphylococcus Auricularis (SauriCas9) expands the DNA targeting scope

Z Hu, S Wang, C Zhang, N Gao, M Li, D Wang… - PLoS …, 2020 - journals.plos.org
Compact CRISPR/Cas9 systems that can be packaged into an adeno-associated virus
(AAV) hold great promise for gene therapy. Unfortunately, currently available small Cas9 …

Optimized design parameters for CRISPR Cas9 and Cas12a homology-directed repair

MS Schubert, B Thommandru, J Woodley, R Turk… - Scientific Reports, 2021 - nature.com
CRISPR–Cas proteins are RNA-guided nucleases used to introduce double-stranded
breaks (DSBs) at targeted genomic loci. DSBs are repaired by endogenous cellular …

Homozygous might be hemizygous: CRISPR/Cas9 editing in iPSCs results in detrimental on-target defects that escape standard quality controls

D Simkin, V Papakis, BI Bustos, CM Ambrosi, SJ Ryan… - Stem Cell Reports, 2022 - cell.com
The ability to precisely edit the genome of human induced pluripotent stem cell (iPSC) lines
using CRISPR/Cas9 has enabled the development of cellular models that can address …

Harnessing the evolving CRISPR/Cas9 for precision oncology

T Li, S Li, Y Kang, J Zhou, M Yi - Journal of Translational Medicine, 2024 - Springer
Abstract The Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)/Cas9
system, a groundbreaking innovation in genetic engineering, has revolutionized our …

NmeCas9 is an intrinsically high-fidelity genome-editing platform

N Amrani, XD Gao, P Liu, A Edraki, A Mir, R Ibraheim… - Genome Biology, 2018 - Springer
Background The development of CRISPR genome editing has transformed biomedical
research. Most applications reported thus far rely upon the Cas9 protein from Streptococcus …

Decorating chromatin for enhanced genome editing using CRISPR-Cas9

E Chen, E Lin-Shiao, M Trinidad… - Proceedings of the …, 2022 - National Acad Sciences
CRISPR-associated (Cas) enzymes have revolutionized biology by enabling RNA-guided
genome editing. Homology-directed repair (HDR) in the presence of donor templates is …

In planta gene targeting can be enhanced by the use of CRISPR/Cas12a

F Wolter, H Puchta - The Plant Journal, 2019 - Wiley Online Library
The controlled change of plant genomes by homologous recombination (HR) is still difficult
to achieve. We previously developed the in planta gene targeting (ipGT) technology which …