Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently

A Currin, N Swainston, PJ Day, DB Kell - Chemical Society Reviews, 2015 - pubs.rsc.org
The amino acid sequence of a protein affects both its structure and its function. Thus, the
ability to modify the sequence, and hence the structure and activity, of individual proteins in …

Single‐chain fragment variable produced by phage display technology: Construction, selection, mutation, expression, and recent applications in food safety

L Li, S Wu, Y Si, H Li, X Yin… - Comprehensive Reviews in …, 2022 - Wiley Online Library
Immunoassays are reliable, efficient, and accurate methods for the analysis of small‐
molecule harmful substances (such as pesticides, veterinary drugs, and biological toxins) …

[HTML][HTML] The evolving art of creating genetic diversity: From directed evolution to synthetic biology

A Currin, S Parker, CJ Robinson, E Takano… - Biotechnology …, 2021 - Elsevier
The ability to engineer biological systems, whether to introduce novel functionality or
improved performance, is a cornerstone of biotechnology and synthetic biology. Typically …

Engineering a multifunctional nitroreductase for improved activation of prodrugs and PET probes for cancer gene therapy

JN Copp, AM Mowday, EM Williams, CP Guise… - Cell Chemical …, 2017 - cell.com
Gene-directed enzyme-prodrug therapy (GDEPT) is a promising anti-cancer strategy.
However, inadequate prodrugs, inefficient prodrug activation, and a lack of non-invasive …

Hot Flows: Evolving an Archaeal Glucose Dehydrogenase for Ultrastable Carba-NADP+ Using Microfluidics at Elevated Temperatures

I Zachos, R Genth, S Sutiono, M Marczynski… - ACS …, 2022 - ACS Publications
Here, we describe the successful engineering of a promiscuous glucose dehydrogenase
from the thermophilic archaeon, Saccharolobus solfataricus, toward the thermostable and …

Economical analysis of saturation mutagenesis experiments

CG Acevedo-Rocha, MT Reetz, Y Nov - Scientific reports, 2015 - nature.com
Saturation mutagenesis is a powerful technique for engineering proteins, metabolic
pathways and genomes. In spite of its numerous applications, creating high-quality …

Engineering and expression strategies for optimization of L-Asparaginase development and production

AN Shishparenok, YA Gladilina… - International Journal of …, 2023 - mdpi.com
Genetic engineering for heterologous expression has advanced in recent years. Model
systems such as Escherichia coli, Bacillus subtilis and Pichia pastoris are often used as host …

Cataract-causing mutation R48C increases γA-crystallin susceptibility to oxidative stress and ultraviolet radiation

J Wu, W Xu, W Wu, J Xu, S Zheng, X Shentu… - International Journal of …, 2022 - Elsevier
Among all congenital cataracts caused by genetic mutations, approximately half are caused
by a mutation in crystallin genes, and accounts the leading cause of blindness in children …

[HTML][HTML] Epitope map** via in vitro deep mutational scanning methods and its applications

MM Keen, AD Keith, EA Ortlund - Journal of Biological Chemistry, 2024 - Elsevier
Epitope map** is a technique employed to define the region of an antigen that elicits an
immune response, providing crucial insight into the structural architecture of the antigen as …

Simultaneous selection and counter‐selection for the directed evolution of proteases in E. coli using a cytoplasmic anchoring strategy

ZM Carrico, KL Strobel, ME Atreya… - Biotechnology and …, 2016 - Wiley Online Library
With the goal of generating new enzymes that can cleave custom sequences, this article
describes a selection strategy for evolving proteases with desirable characteristics. Positive …