Specific and effective detection of anammox bacteria using PCR primers targeting the 16S rRNA gene and functional genes

Y Yang, M Li, H Li, XY Li, JG Lin, M Denecke… - Science of the Total …, 2020 - Elsevier
Anaerobic ammonium-oxidizing (anammox) bacteria play an important role in the nitrogen
cycle by coupling ammonium and nitrite to produce dinitrogen gas (N 2). Polymerase chain …

Genome-resolved metagenomics reveals distinct phosphorus acquisition strategies between soil microbiomes

X Wu, C Rensing, D Han, KQ **ao, Y Dai, Z Tang… - Msystems, 2022 - journals.asm.org
Enhancing soil phosphate solubilization is a promising strategy for agricultural sustainability,
while little is known about the mechanisms of how microorganisms cope with differing …

Microbial imbalance in inflammatory bowel disease patients at different taxonomic levels

MT Alam, GCA Amos, ARJ Murphy, S Murch… - Gut pathogens, 2020 - Springer
Background Inflammatory bowel disease (IBD), is a debilitating group of chronic diseases
including Crohn's Disease (CD) and ulcerative colitis (UC), which causes inflammation of …

The effect of 16S rRNA region choice on bacterial community metabarcoding results

YS Bukin, YP Galachyants, IV Morozov, SV Bukin… - Scientific data, 2019 - nature.com
In this work, we compare the resolution of V2-V3 and V3-V4 16S rRNA regions for the
purposes of estimating microbial community diversity using paired-end Illumina MiSeq …

Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host's metabolism

P Zheng, B Zeng, C Zhou, M Liu, Z Fang, X Xu… - Molecular …, 2016 - nature.com
Major depressive disorder (MDD) is the result of complex gene–environment interactions.
According to the World Health Organization, MDD is the leading cause of disability …

Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis

B Yang, Y Wang, PY Qian - BMC bioinformatics, 2016 - Springer
Abstract Background Prokaryotic 16S ribosomal RNA (rRNA) sequences are widely used in
environmental microbiology and molecular evolution as reliable markers for the taxonomic …

Sex differences in gut microbiota in patients with major depressive disorder

J Chen, P Zheng, Y Liu, X Zhong, H Wang… - Neuropsychiatric …, 2018 - Taylor & Francis
Objective Our previous studies found that disturbances in gut microbiota might have a
causative role in the onset of major depressive disorder (MDD). The aim of this study was to …

Antibiotic resistance genes and associated bacterial communities in agricultural soils amended with different sources of animal manures

XM Han, HW Hu, QL Chen, LY Yang, HL Li… - Soil Biology and …, 2018 - Elsevier
Land application of animal manures is a major dissemination route for antibiotic resistance
genes (ARGs) in agro-ecosystems, which are a potential risk to public health if they migrate …

High stability and metabolic capacity of bacterial community promote the rapid reduction of easily decomposing carbon in soil

R Huang, TW Crowther, Y Sui, B Sun… - Communications …, 2021 - nature.com
Irreversible climate change alters the decomposition and sequestration of soil carbon (C).
However, the stability of C components in soils with different initial organic matter contents …

Considerations for mosquito microbiome research from the Mosquito Microbiome Consortium

N Dada, N Jupatanakul, G Minard, SM Short, J Akorli… - Microbiome, 2021 - Springer
In the past decade, there has been increasing interest in mosquito microbiome research,
leading to large amounts of data on different mosquito species, with various underlying …