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Roles of microRNAs in abiotic stress response and characteristics regulation of plant
F Zhang, J Yang, N Zhang, J Wu, H Si - Frontiers in Plant Science, 2022 - frontiersin.org
MicroRNAs (miRNAs) are a class of non-coding endogenous small RNAs (long 20–24
nucleotides) that negatively regulate eukaryotes gene expression at post-transcriptional …
nucleotides) that negatively regulate eukaryotes gene expression at post-transcriptional …
Plant and animal small RNA communications between cells and organisms
Since the discovery of eukaryotic small RNAs as the main effectors of RNA interference in
the late 1990s, diverse types of endogenous small RNAs have been characterized, most …
the late 1990s, diverse types of endogenous small RNAs have been characterized, most …
Revisiting criteria for plant microRNA annotation in the era of big data
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …
endonucleolytic processing of hairpin precursors. Many function as essential …
miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs
Abstract miRDeepFinder is a software package developed to identify and functionally
analyze plant microRNAs (miRNAs) and their targets from small RNA datasets obtained from …
analyze plant microRNAs (miRNAs) and their targets from small RNA datasets obtained from …
miRBase: integrating microRNA annotation and deep-sequencing data
A Kozomara, S Griffiths-Jones - Nucleic acids research, 2010 - academic.oup.com
Abstract miRBase is the primary online repository for all microRNA sequences and
annotation. The current release (miRBase 16) contains over 15 000 microRNA gene loci in …
annotation. The current release (miRBase 16) contains over 15 000 microRNA gene loci in …
Classification and comparison of small RNAs from plants
MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …
components of endogenous plant transcriptomes, as well as common responses to …
Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks
Plant genomes are the source of large numbers of small RNAs, generated via a variety of
genetically separable pathways. Several of these pathways converge in the production of …
genetically separable pathways. Several of these pathways converge in the production of …
A microRNA superfamily regulates nucleotide binding site–leucine-rich repeats and other mRNAs
Abstract Analysis of tomato (Solanum lycopersicum) small RNA data sets revealed the
presence of a regulatory cascade affecting disease resistance. The initiators of the cascade …
presence of a regulatory cascade affecting disease resistance. The initiators of the cascade …
RNA-based antiviral immunity
SW Ding - Nature Reviews Immunology, 2010 - nature.com
In eukaryotic RNA-based antiviral immunity, viral double-stranded RNA is recognized as a
pathogen-associated molecular pattern and processed into small interfering RNAs (siRNAs) …
pathogen-associated molecular pattern and processed into small interfering RNAs (siRNAs) …
Evolution and Functional Diversification of MIRNA Genes
MicroRNAs (miRNAs) are small regulatory RNAs found in diverse eukaryotic lineages. In
plants, a minority of annotated MIRNA gene families are conserved between plant families …
plants, a minority of annotated MIRNA gene families are conserved between plant families …