[HTML][HTML] A review of protein–protein interaction network alignment: From pathway comparison to global alignment

CY Ma, CS Liao - Computational and Structural Biotechnology Journal, 2020 - Elsevier
Network alignment provides a comprehensive way to discover the similar parts between
molecular systems of different species based on topological and biological similarity. With …

[HTML][HTML] AntNetAlign: Ant colony optimization for network alignment

GR Corominas, MJ Blesa, C Blum - Applied Soft Computing, 2023 - Elsevier
Network Alignment (NA) is a hard optimization problem with important applications such as,
for example, the identification of orthologous relationships between different proteins and of …

[BOOK][B] Optimizing Global Network Alignment in Protein-Protein Interaction Networks

EG Tuncay - 2022 - search.proquest.com
Abstract Global Network Alignment in Protein-Protein Interaction Networks is an NP-
complete problem due to the contradicting nature of its biological and topological alignment …

Parallel Exchange of Randomized SubGraphs for Optimization of Network Alignment: PERSONA

EG Tuncay, RC Erdur, T Conrad - IEEE/ACM Transactions on …, 2022 - ieeexplore.ieee.org
The aim of Network Alignment in Protein-Protein Interaction Networks is discovering
functionally similar regions between compared organisms. One major compromise for …

Network alignment: an integrative view

G Rodríguez Corominas - 2021 - upcommons.upc.edu
The Network Alignment problem is an NP-complete Combinatorial Optimization problem in
graphs. The goal is to find an alignment between the input networks, ie, a map** between …

[BOOK][B] Enhancing and Evaluating Global Pairwise Alignment of Protein-Protein Interaction Networks

AA Elmsallati - 2017 - search.proquest.com
Network Alignment over graph-structured data has recently received considerable attention
in many application domains. Global network alignment tries to uniquely find the best …